Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02828 ATGTGTTCATCTGAATGGTGTGGGAGGCATGACATAAGGCATCCTTTCAGGCTGAATAATAGTAGTCCAAGCTATTGTGGTGACCACAGGTACACCCTCTCTTGCGAGAATGATAACCAACTCTTTCTCTATCTCAAATCAATCAAGTTCCAAGTGCAATCAATTAACTACAACAACTACACAATTCGACTAGTAGATGCCAATGTTGCCCTGCATAGCCATGATCACTCATACCTCCTTCCTTATTCTTTAACCTCCTCCAACTTCACCAGTGCCCAAGATGAACCATATGATGATTGGTTCTATAAACAGCATCATTTAGTTGATGTTATTAGATTGACAAAGCAGATGGTATATTTGATGAGGTGCCCACCATATGGAGTAGAATCTTCTTCTGCTGTTGCAACTTGCATGAATGGATCCTATGCGCTTGGGAGTACATTCTATGTAAGTGATATTGATAAAACTCTCCAGGATTTGGCGGTCAGAGACTCGTGTCATATAGAGTGCATATATCTGACTTCATGGCCTGCTGAAATCAAACACAGAAATAATTCATGCACAGACATCCATCATATGCTGCTCTACGGGTTTGAACTTTCTTGGTTGAAAGTATATTGCAAGTTTAAGGCCATGCTCACTGATCATAACAAAGTCATTTGTTATAAGCCTTCACTTATACCTAAAAGTTTCCTAGACTCAATGTATGTTGAGGTTCTAATGGCTGGAACGGTTTTATTTGCTCTTGCCAAATTTGCACTTGGAGCTCCAAGCATCATTATCTTCTGCATATATAAATGGAGACGGAGGCATTTATCCATATATGATAGTATCGAAGATTTTCTGCGAAGTGACAATAACATTATGCCAATTAGATACTCCTACAAAGAAATCAAGAACATAACTGGAAAGTTCAAGACTAAACTAGGAAATGGAGGCTATGGCTCTGTCTTCCAAGGAAAACTTCGAAGCGGTCGTCTTGTAGCTGTTAAGGTATTGAATAAGGCCGAATCCAATGGCCAGGAGTTCATCAATGAAGTTGCTACTATTGGAAGAATTCACCATGTTAATGTGGTGCAACTCATTGGTTTCTGTGTGGAGGGATCAAAGCGTGCTCTCATATACGAGTTGATGGAAAATGGATCACTAGAAAAATACATATTTTCCCCTCAAGACAAGGCTTCCTTAAGTTGTAAAGAGCTCCACTCCATTTCCCTTGGAGTAGCACGTGGTATTGAATACTTGCATAATGGCTGTGACATGAAAATTCTGCACTTTGACATCAAACCTCACAACATTCTTTTGGATGAGAACTTTAATCCAAAAGTCTCTGATTTTGGACTTGCAAGGCTATCTCCCACTGATAAAAGCATTGTGTCTCTGACTGCGGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTTTTCTACAGAAATGTTGGCGCAATCTCATACAAAGCCGATGTCTATAGCTTTGGGATGTTGTTAATGGAGATGGCTAGCAGAAGGAAGAATTTGAATACACAGACTGAAAATTCGAGCCAAATATATTTTCCCTTTTGGGTTTATGATGAATTGCAGGATGGAAGGGAAATAACAATAGAAAATGATTCAGATGAAGAGATGAAGTTGGCAAAAAGAATGATGATTGCGGCATTGTGGTGTATACAAACAAAGCCTAATGATCGACCTTCAATGAAGAGAGTTGTGGAGATGCTAGAACAAGATGATGACTTAGAAATGCCTCCAAAACCATACTTCTACCCACTTGATGCACCCACAGAAGAGAATGGTGAAGATAATACAACTCAAAACAGTTCAAAATTATCCTCTGATGACGTCTCTTCAGTCAGTGATTCAAAGGAATAG 1869 0.3965 MCSSEWCGRHDIRHPFRLNNSSPSYCGDHRYTLSCENDNQLFLYLKSIKFQVQSINYNNYTIRLVDANVALHSHDHSYLLPYSLTSSNFTSAQDEPYDDWFYKQHHLVDVIRLTKQMVYLMRCPPYGVESSSAVATCMNGSYALGSTFYVSDIDKTLQDLAVRDSCHIECIYLTSWPAEIKHRNNSCTDIHHMLLYGFELSWLKVYCKFKAMLTDHNKVICYKPSLIPKSFLDSMYVEVLMAGTVLFALAKFALGAPSIIIFCIYKWRRRHLSIYDSIEDFLRSDNNIMPIRYSYKEIKNITGKFKTKLGNGGYGSVFQGKLRSGRLVAVKVLNKAESNGQEFINEVATIGRIHHVNVVQLIGFCVEGSKRALIYELMENGSLEKYIFSPQDKASLSCKELHSISLGVARGIEYLHNGCDMKILHFDIKPHNILLDENFNPKVSDFGLARLSPTDKSIVSLTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNTQTENSSQIYFPFWVYDELQDGREITIENDSDEEMKLAKRMMIAALWCIQTKPNDRPSMKRVVEMLEQDDDLEMPPKPYFYPLDAPTEENGEDNTTQNSSKLSSDDVSSVSDSKE 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02828 622 SUPERFAMILY Protein kinase-like (PK-like) 284 574 IPR011009 -
Aip07g02828 622 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Aip07g02828 622 SMART serkin_6 303 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02828 622 Gene3D Phosphorylase Kinase; domain 1 282 377 - -
Aip07g02828 622 Pfam Wall-associated receptor kinase galacturonan-binding 2 66 IPR025287 GO:0030247
Aip07g02828 622 PANTHER RUST RESISTANCE KINASE LR10-RELATED 245 599 IPR045874 GO:0004672
Aip07g02828 622 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 210 IPR045874 GO:0004672
Aip07g02828 622 ProSiteProfiles Protein kinase domain profile. 303 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02828 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Aip07g02828 622 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 2 210 - -
Aip07g02828 622 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 245 599 - -
Aip07g02828 622 MobiDBLite consensus disorder prediction 596 614 - -
Aip07g02828 622 MobiDBLite consensus disorder prediction 574 622 - -
Aip07g02828 622 Pfam Protein kinase domain 306 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02828 622 Gene3D Transferase(Phosphotransferase) domain 1 378 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02828 Aip-Chr7 113978078 113981749 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02828 219 614 Receptor kinase-like Gene Family AT4G18250 43.066 5.66e-104 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip07g02828 Pkinase 5.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02828 - - aip:107607706 1244.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02828 07 113978078 113981749 Aip07g02828 07 113978078 113981749 ECH