Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02826 ATGTGTTCATCTGGGTGGTGTGGGAGGCATGAGATAAGGTATCCTTTCAGGCTGAATAATAGTAGTCAAAGCCACTGTGGTGAGCACAGGTACACCCTCTCTTGCGAGAATGATAACCAACTCTTTCTGTATCTCAAATCAATCAAGTTCCAAGTGCAATCAATTAACTACAACAACTACACAATTCGACTAGTAGATGCCAATGTTGCTCTGCATAGCCGTGATCACTCATACCTCCTTCCTTATTCTTTAGCCTCCTACAACTTCACCCATGCCAAAGATGAACCATATGATTGGTTCTATAAACAGCATAATGATGTTATTATATTGACAAAGCAGATGTTATATTTGAAGTGCCCACCATATGGAGTAAAATCTTCTGCTACTGCTGGTGCAACAACCTGCATGAATGGATCTTATTCGCTTGGGAGTACATTCTATGTCAGTGATATTGATAAAACTCTCCAGGATTTGGCGTTTGGAGACTCATGTCATATAGAGTGGATGTATCTAACTTCATGGCCTACTGAAATCAAACACACATATATTTCATGCACAGACAACCATCATATGCTGCTCTACGGGTTTGAACTTTCTTGGTTGAAAGCATATTGCAAGAATGATGATCCAGGATATGCCATGCTCAGTGATCATAAAGTCATTTGTTATAAGCCTCCACTTATGCCGAAAATTTTTTTATTTGTTCTTGCCAAATTTGTACTTGGTGCTCCATGCATTGTTATCCTCTGCATATATAAATGGAGACGAAGACATTTATCGATATATGACAGTATCGAAGATTTTCTGCGAAGTGACAACAACATCATGCCAATTAGATACTCCTACAAAGAAATCAAGAACATAACTGAAAAGTTCAAGACTAAACTAGGAAATGGAGGCTATGGCTCTGTCTTCCAAGGAAAACTTCGAAGCGGTCGTCTAGCAGCTGTTAAGGTATTGAACGAGGCCAAATCCAATGGCCAAGAATTCATCAATGAAGTTGCTACTATTGGAAGAATTCACCATGTTAATGTGGTGCAACTCATTGGTTTCTGTGTGGAGGGATCAAAGCGTTGTTTGGTGTATGAGTTAATGCAAAATGGCTCTTTAGAAAAATACATATTTTCACCTCAAGAGAGTGCTTCAAATTCCTTAAGTTGTGAAAAACTGTACAACATTTCTCTTGGAGTGGCACGTGGTATTGAGTATCTGCATAATGGTTGCGACATTAAAATTCTGCACTTTGACATTAAGCCTCATAACATTCTTTTGGATGAGAACTTCAATCCAAAAGTCTCTGATTTTGGACTTGCGAGGTTATGTCCCACTGATAAAAGCATTGTGTCTCTGACTGCAGCAAGAGGAACCATAGGATACATGGCTCCTGAGCTTTTCTACAGAAATGTTGGCGCAATCTCGTACAAAGCCGATGTCTATAGCTTTGGGATGTTGTTAATGGAGATGGCTAGTAGAAGGAAGAATTTGAATGCACAGACTGAAAATTCCAGCCGGATATATTTTCCCTTTTGGGTTTATGATCAATTGCATGATGGAAGGGAAATAACAATAGAAAATGACACGGCTGACGAGATGAAGTTGGCAAAGAAAATGATGATTGTGGCATTGTGGTGTATACAGACAAAGCCTAATGATCGACCATCAATGAAGAAAGTTGTGGAGATGCTTGAACAAGATGATGAAGAATTGGAAATGTCTCCCAAGCCTTACTTCTATCCACTTGATGAACCTGAAGGCGAAGTTGGAGAAGATAGCAGTTCAAGGGTATCCTCTGATATGTCATCAGTTAGTGGTTCCAAAGAATAG 1824 0.3942 MCSSGWCGRHEIRYPFRLNNSSQSHCGEHRYTLSCENDNQLFLYLKSIKFQVQSINYNNYTIRLVDANVALHSRDHSYLLPYSLASYNFTHAKDEPYDWFYKQHNDVIILTKQMLYLKCPPYGVKSSATAGATTCMNGSYSLGSTFYVSDIDKTLQDLAFGDSCHIEWMYLTSWPTEIKHTYISCTDNHHMLLYGFELSWLKAYCKNDDPGYAMLSDHKVICYKPPLMPKIFLFVLAKFVLGAPCIVILCIYKWRRRHLSIYDSIEDFLRSDNNIMPIRYSYKEIKNITEKFKTKLGNGGYGSVFQGKLRSGRLAAVKVLNEAKSNGQEFINEVATIGRIHHVNVVQLIGFCVEGSKRCLVYELMQNGSLEKYIFSPQESASNSLSCEKLYNISLGVARGIEYLHNGCDIKILHFDIKPHNILLDENFNPKVSDFGLARLCPTDKSIVSLTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNAQTENSSRIYFPFWVYDQLHDGREITIENDTADEMKLAKKMMIVALWCIQTKPNDRPSMKKVVEMLEQDDEELEMSPKPYFYPLDEPEGEVGEDSSSRVSSDMSSVSGSKE 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02826 607 SMART serkin_6 290 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02826 607 Gene3D Phosphorylase Kinase; domain 1 269 364 - -
Aip07g02826 607 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 231 583 - -
Aip07g02826 607 Pfam Wall-associated receptor kinase galacturonan-binding 2 66 IPR025287 GO:0030247
Aip07g02826 607 Pfam Protein kinase domain 293 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02826 607 ProSiteProfiles Protein kinase domain profile. 290 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02826 607 MobiDBLite consensus disorder prediction 565 607 - -
Aip07g02826 607 PANTHER RUST RESISTANCE KINASE LR10-RELATED 231 583 IPR045874 GO:0004672
Aip07g02826 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Aip07g02826 607 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 2 207 - -
Aip07g02826 607 Gene3D Transferase(Phosphotransferase) domain 1 365 575 - -
Aip07g02826 607 SUPERFAMILY Protein kinase-like (PK-like) 271 563 IPR011009 -
Aip07g02826 607 MobiDBLite consensus disorder prediction 590 607 - -
Aip07g02826 607 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 207 IPR045874 GO:0004672
Aip07g02826 607 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02826 Aip-Chr7 113940405 113954840 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02826 224 597 Receptor kinase-like Gene Family AT4G18250 45.455 1.67e-104 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip07g02826 Pkinase 5.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02826 - - aip:107607706 994.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02826 07 113940405 113954840 Aip07g02826 07 113940405 113954840 ECH