Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02825 ATGTTGTCCCTTTGTTCATTTTTGGTACCCCTTCTACTGCTGCTGGGGATCTCCTTAAACGTTTTCAATTATAGACCCCGGTGGGATAGCCTGGTGGCAATTGATGCAGACAAAAGAATGTGTTCATCTGGGTTGTGTGGGAGGCATGACATAAGGTACCAGTTCAGGCTGAATAATAGTAGTCCAAGCCACTGTGGTGAGCACAGGTACACCCTCTCTTGCGAGAATGATAACCAACTCTTTCTCTATCTCAAATCAATCAAGTTCCAAGTGCAGTCAATTAACTATAACAACTACACAATTCGACTTGTTGACGTCAATGTTCCCCTGCATACCCATAATCACTCTTCTCTCCCTAGTTATTCTTTGACCTCCTCCAACTTCACCAGAGATGATCCATATCAATATTGGTTCTATACACAGCATTTTAAAGATGTTATTAGATTGACAAAGCAGATGGTATATTTGATGAGGTGCCCACCATATGGAGTAGAATCTTCTACTGCTGTTGCAACTTGCACGAATGGATCCTATGCAATTGGGAGTACATTCTATGTCAGTGATCTTGACAAGCGTCTCCAGGATTTGGCGTTCAGAGACTCGTGTCATATAGATTGGATGTATTTGACTTCATGGCCTGCTGAAATCAAGCAGATCAACATTTCATGCACAGACATCCATCATATGCTGCTCTACGGGTTTGAACTTTCCTGGATGAAAGGATATTGCTATAATGACACAGACTATGCCATGCTCGGTGATCACAACAACATCGTTTGTTATAACAATTATTACGAAAGGTTATCTCCATTTCAAAATTATGTACTTTCATGGATTGTTCTTTGTCTAACGGATGGAACGATTTTCTTTGTTCTTGGCAAATTTGGACTTGGAGCTCTATTCATCGTTATTTTCTGCATATGTAAATGGAGACGAAGACATTTATCCATATACGACAGTATTGAAGATTTTCTGCGAAGTGACAATAACATCATGCCAATTAGATACTCCTATAAAGAAATCAAGAACATAACTGGAAAGTTCAAGACTAAACTAGGAAATGGAGGCTATGGCTCTGTCTTCCAAGGAAAACTTCGAAGCGGTCGTCTTGTAGCTGTTAAGGTATTGAATAAGGCCAAATCCAATGGCCAGGAGTTCATCAATGAAGTTGCTACTATTGGAAGAATTCACCATGTTAATGTGGTGCAACTCATTGGTTTCTGTGTGGAGGGATCAAAGCGTTGTTTGGTGTATGAGTTAATGCAAAATGGCTCTTTAGAGAAATACATATTTTCACCTCAAGAGGGTGCTTCAAATTCCTTAAATTGTGAAAAACTGTACAACATTTCTCTTGGAGTGGCCCGTGGTATTGAGTATCTGCATAATGGTTGCCACATTAAAATTCTGCACTTTGACATTAAGCCTCATAACATTCTTTTGGATGAGAACTTCAATCCAAAAGTCTCTGATTTTGGACTTGCAAGGCTTTATCCCACTGATAAAAGCATTGTGTCTCTGACCGCAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTCTTCTATAGAAACGTCGGCACAATCTCATACAAAGCAGATGTTTATAGCTTTGGGATGTTGTTGATGGAAATGGCTAGTAGAAGGAAGAATTTGAATGCTTTGACTGAAAATTCCAGCCAAATATATTTTCCTTTCTGGGTTTATGATCAATTGCTTGATGGAAGGGAAATAACAATAGAGAATGACACAGATGAAGAGATGAAGTTGGCAAGAAAAATGATGATTGTGGCATTGTGGTGTATACAGACAAAGCCTAATGATCGACCTTCAATGAAGAAAGTTGTGGAGATCCTAGAACAAGATGAGGACTTATTAGAAATGCCTCCTAAGCCTTACTTCTATCCACTTGATGAACCTGCAGACGAAGTTGGAGAAGAAAACAGTTCAAGGCTATCCTCTGTTATCTCATCAGTTACTGGTTCCAAAGAATAG 1992 0.3966 MLSLCSFLVPLLLLLGISLNVFNYRPRWDSLVAIDADKRMCSSGLCGRHDIRYQFRLNNSSPSHCGEHRYTLSCENDNQLFLYLKSIKFQVQSINYNNYTIRLVDVNVPLHTHNHSSLPSYSLTSSNFTRDDPYQYWFYTQHFKDVIRLTKQMVYLMRCPPYGVESSTAVATCTNGSYAIGSTFYVSDLDKRLQDLAFRDSCHIDWMYLTSWPAEIKQINISCTDIHHMLLYGFELSWMKGYCYNDTDYAMLGDHNNIVCYNNYYERLSPFQNYVLSWIVLCLTDGTIFFVLGKFGLGALFIVIFCICKWRRRHLSIYDSIEDFLRSDNNIMPIRYSYKEIKNITGKFKTKLGNGGYGSVFQGKLRSGRLVAVKVLNKAKSNGQEFINEVATIGRIHHVNVVQLIGFCVEGSKRCLVYELMQNGSLEKYIFSPQEGASNSLNCEKLYNISLGVARGIEYLHNGCHIKILHFDIKPHNILLDENFNPKVSDFGLARLYPTDKSIVSLTAARGTIGYMAPELFYRNVGTISYKADVYSFGMLLMEMASRRKNLNALTENSSQIYFPFWVYDQLLDGREITIENDTDEEMKLARKMMIVALWCIQTKPNDRPSMKKVVEILEQDEDLLEMPPKPYFYPLDEPADEVGEENSSRLSSVISSVTGSKE 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02825 663 Pfam Protein kinase domain 349 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02825 663 Pfam Wall-associated receptor kinase galacturonan-binding 41 105 IPR025287 GO:0030247
Aip07g02825 663 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Aip07g02825 663 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 288 642 - -
Aip07g02825 663 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 38 246 - -
Aip07g02825 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Aip07g02825 663 ProSiteProfiles Protein kinase domain profile. 346 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02825 663 MobiDBLite consensus disorder prediction 646 663 - -
Aip07g02825 663 SMART serkin_6 346 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02825 663 Gene3D Phosphorylase Kinase; domain 1 325 420 - -
Aip07g02825 663 Gene3D Transferase(Phosphotransferase) domain 1 421 631 - -
Aip07g02825 663 MobiDBLite consensus disorder prediction 636 663 - -
Aip07g02825 663 SUPERFAMILY Protein kinase-like (PK-like) 327 619 IPR011009 -
Aip07g02825 663 PANTHER RUST RESISTANCE KINASE LR10-RELATED 38 246 IPR045874 GO:0004672
Aip07g02825 663 PANTHER RUST RESISTANCE KINASE LR10-RELATED 288 642 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02825 Aip-Chr7 113936732 113939692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02825 31 659 Receptor kinase-like Gene Family AT5G38260 35.897 4.40e-108 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip07g02825 Pkinase 7.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02825 - - aip:107607706 1025.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02825 07 113936732 113939692 Aip07g02825 07 113936732 113939692 ECH