Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02814 ATGTTCGATGATCACGGCTTTGATGAAGGGTATAACATTGACTCACTCGAAGACATTGTGATGATTGAATTTTGGAACATCAGGGATGAAGATGTATGTCATTTTCACTTTTCTGATGCCGACATTGCATTTGAGTTCTACAATAGATATACAAGGACAAGAGGCTTTATTGCTTGGAAGAATAGGACTAGGAAGAGTCATGCAGGCGTACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGATCACAAAATAATAATGACATTGGAAACTTTAAGAAAAAACCTACACCAGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCGTCTAGATGGACCTAGTGGTCGTTGGTTTATTTCTTATTTTTTTTATGAACACAGTCATCCGCTTTTGGATCCTCGATTGACTGGATTGCTTCGTGGGCATAGATTCATGTCCGAGGCTGATATTGGCCACATGATTAACATGAAAAAGGGTGGGATTAGTGTTGGGCAGATATATCAAGCATTAGCAAATCAGGCAGCTTTGAAGTATCTACAAGATCGAGCAATAAATGACCTTTCTCTCTATTTTAATCATCACGTGGATGCCGATGGTACTTTGCGCAATTTATTCTGGTGCGATGGTCTCAGTAGGGCAGATTACTCATTATTTGGCGATGTGCTGGCTTTTGATGCTACCTATAAGAGGAATAAATATATGTGTCCATTGGTGGTATTTTCTGGTGTCAATTATCACAATCAAATGATTAGTTTTGCTGCTGCTTTAATTTGCGACAAGGAAAAAAACACATATAGGTGGTTGCTACAACAAATGAAGGTGGCAATGAATGGAAAAGCACCTGTTTCGGTTATCACGGATGGTGATCTATCAATGAAGTTCACCATTGAGAAAGAGTTTCCTAATGCACATCATAGATTATGTGCATGGCATCTGATTCGCAATGCAACAAGTAATATTGGCAAGCCCCACTTTACCTCCATGTTTAAAAAGTGTATGCTAGGCAACTATGAAATTGATATATTTCGTCAAAAGTGGTTTGAAATGGTTGAGGGATTTGGTGTCGAAAACAAGAGTTGGGTCCTAGATATGTATAAGAAGAGACATTCATGGGCAACTGCACATATAAGAGGGAAGTTTTTTGCTGGTTTTCGGACTACTTCTCGGTGCGAGGGATTAAACTCAATCATTGCAAAGTATGTCAATTCAAGGTACAATCTGGTTGAGTTCATTCAACACTTTAATCGATGTGTCGACCATATTCAGTGGAAAGAGGTCCAGGCTGACCACGCATCTGTGAATGGGAGACCCATTTGCGTCTTGGTGCATGAAGATATAGATGAGCTTCCAAGGTCATTAGTCTTGCCTTGGTGGACCAAGACTGCCAAAGTAGGTTTGCAAAATGCGGCTGGACATAAAGGATTCTaa 1440 0.3979 MFDDHGFDEGYNIDSLEDIVMIEFWNIRDEDVCHFHFSDADIAFEFYNRYTRTRGFIAWKNRTRKSHAGVLKLKNFVCHREGFRSQNNNDIGNFKKKPTPETRCGCSAMMEIRLDGPSGRWFISYFFYEHSHPLLDPRLTGLLRGHRFMSEADIGHMINMKKGGISVGQIYQALANQAALKYLQDRAINDLSLYFNHHVDADGTLRNLFWCDGLSRADYSLFGDVLAFDATYKRNKYMCPLVVFSGVNYHNQMISFAAALICDKEKNTYRWLLQQMKVAMNGKAPVSVITDGDLSMKFTIEKEFPNAHHRLCAWHLIRNATSNIGKPHFTSMFKKCMLGNYEIDIFRQKWFEMVEGFGVENKSWVLDMYKKRHSWATAHIRGKFFAGFRTTSRCEGLNSIIAKYVNSRYNLVEFIQHFNRCVDHIQWKEVQADHASVNGRPICVLVHEDIDELPRSLVLPWWTKTAKVGLQNAAGHKGF 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02814 479 Pfam FAR1 DNA-binding domain 45 135 IPR004330 -
Aip07g02814 479 Pfam MULE transposase domain 225 319 IPR018289 -
Aip07g02814 479 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 177 437 IPR031052 GO:0006355
Aip07g02814 479 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 33 174 IPR031052 GO:0006355
Aip07g02814 479 PANTHER OS02G0262500 PROTEIN 177 437 - -
Aip07g02814 479 PANTHER OS02G0262500 PROTEIN 33 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02814 Aip-Chr7 113862743 113864537 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g02814 MULE 1.5e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02814 - - ahf:112763780 936.406