Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02776 ATGACTTGCCCATTGACTGGAAAACCTGTTACTGAGCTTGAAGAACCAGTTCGCAGTGTGGAATGCAAGCATATTTATGAAAAGAGAATAATAATGCAACATATAAAGTCATCCAATCGATGTCCAATATCAGGTTGCCCAAAGAAATTGCGCGCAGATAGGGTGGTGCAGGATGCCTTGTTACTGATTGAGATTGAGGAATTGCGCAAAATGAACAAAAAGAAACTGAAGTGGAAGACTTTACTCTCCTTAATGAAGACGATTGATGATTGA 273 0.3956 MTCPLTGKPVTELEEPVRSVECKHIYEKRIIMQHIKSSNRCPISGCPKKLRADRVVQDALLLIEIEELRKMNKKKLKWKTLLSLMKTIDD 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02776 90 Pfam Zinc-finger of the MIZ type in Nse subunit 1 46 IPR004181 GO:0008270
Aip07g02776 90 PANTHER UNCHARACTERIZED 1 75 IPR026846 GO:0000724|GO:0019789|GO:0030915
Aip07g02776 90 SUPERFAMILY RING/U-box 1 50 - -
Aip07g02776 90 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 78 IPR013083 -
Aip07g02776 90 ProSiteProfiles Zinc finger SP-RING-type profile. 1 70 IPR004181 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02776 Aip-Chr7 112816602 112818455 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02776 1 50 U-box Gene Family AT1G04510 41.176 1.44e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02776 K22756 - gmx:100804379 110.538