Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02765 ATGAGACATAGTGGATGGAAAGCAAGAGCAAAGCTTGAAGTAGCAGCGTACCGTACCGTACATAGTGGGCTAGTGGCATTGTATGCATCTCCTGTGTCCCTCCAAATGCAGAAAATTGGCTACCTCAACTCACAGCAGACAACCTCAGACGACAAAATATATAGCAGCAATAATAATGATTCTCATTCTTCAACTTCCAAGGTGTGTGCCGCCTGGCCTTGGGAATCAACAATAATGGAGATTTCACCTATGGATGATTTCGACGATTGGGCGCCATTGTTAACCTACAAAAGCACGCAGAAGCTTTTCCTGAACGACTTGCCAGAAGTGGATAACGACTTTGACGACCTTCCACCTCTGGACGATTTCAAGAAAGAGCGCGAGGAAGAGGATCAAGAACACAAGCAGTTACTACAACTTGCTCCGATTAGTACGATTAAGAACAAGAAGAGTGAGTTGGAATACGATGAGATCAAGAAGCACTTCGATTTGCCAATCACAGAAGCTGCTAGCAAGATGAACATTGGTTTGACATTGTTGAAGAGAAGGTGCAGAGAACTCAGCATCAAGCGTTGGCCTCATAGGAAAATCAAGAGCTTGCATTTACTCATACAAACTCTCAAGGAGATAGGTTTGGACAATGAAGTTGAAATGTTGGAGCAAGAAATAAACATGTTGAAGCAAGTTCCAGGGACGGAAATCACACAAGAGACCAAGAAACTAAGGCAGGCTTATTTTAAAGCCAATTACAAAAGGAGGAAACTTTTGGCCTCTAACTGTTCTTCATCATCATCATCATCATCACTTAGCTAA 813 0.4268 MRHSGWKARAKLEVAAYRTVHSGLVALYASPVSLQMQKIGYLNSQQTTSDDKIYSSNNNDSHSSTSKVCAAWPWESTIMEISPMDDFDDWAPLLTYKSTQKLFLNDLPEVDNDFDDLPPLDDFKKEREEEDQEHKQLLQLAPISTIKNKKSELEYDEIKKHFDLPITEAASKMNIGLTLLKRRCRELSIKRWPHRKIKSLHLLIQTLKEIGLDNEVEMLEQEINMLKQVPGTEITQETKKLRQAYFKANYKRRKLLASNCSSSSSSSSLS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02765 270 ProSiteProfiles RWP-RK domain profile. 141 222 IPR003035 -
Aip07g02765 270 Coils Coil 209 229 - -
Aip07g02765 270 Pfam RWP-RK domain 153 200 IPR003035 -
Aip07g02765 270 PANTHER PROTEIN RKD1-RELATED 39 268 - -
Aip07g02765 270 PANTHER PROTEIN RKD4 39 268 IPR044607 GO:0003700
Aip07g02765 270 Coils Coil 120 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02765 Aip-Chr7 112702590 112703996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02765 150 259 AtRKD Transcription Factor Family AT5G53040 55.455 1.76e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aip07g02765 RWP-RK 9.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02765 - - aip:107605887 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02765 07 112702590 112703996 Aip07g02765 07 112702590 112703996 ECH