Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02746 ATGTGTGGACCCAAAAGTGGCAGTGAGAAGCTTTCATGCACATTGTGGAAAAATTATGCATCTGAATTGGTCACTCTTCTTGATGCCAACAAGGCCACCGAATTTATAATCGTACTCCAATTTGCCAAGATGAAGTTCTACAATGGTGTGATGACTATCACCAACACAAACTACACCACAAGGCTCATGATTAATGCTGACCTTGAAGTGGTTAAGAAATTCCGCCAAAAGCTGATTGGACTTGGTACCAAGCATAGCACCAGCGTTGATGTTATAGGCCGGGTAGTGAGGCATTCTCCTTCTGAAAATTTTCTCAGCCATATACCCTACGCACCCATACATCAGATAAAGCAAACTGTTGAGAAATCAACCTACGTGACATGTGGAACGGTGATCGACATTGACAGAGATCATGCATGGTGGTACAAGGCTTGCAGGCAATGCACTCAGGGACTGGAGGCACTTACTGAGCAGTTTTATTGTGCAAAATGCGATGTTTACTCAACAATTTTTGTTGCAAGGTTTTGCATTCAGGTTTGTGTTGTTGATGACTCAGATACAGCAATCTTTGTTCTCTTTGAGAATTCTGCCTCAAAGTTCTTAGGACTAACTGCCGCTGACATCCGCACCAGCATGCTTGCTAAGATCTTTTGGATATGTTCTGATCCAGAAATTATAGCTTCACTTGCTTTAGAAAAGAACATTAAATTGGATGCATTGCAGAAGTTGACCACTGGAACGGGTGTTCGTAGTGGTGAATTGATTCGGAATGGGAGCATAGTCGGAGTTGCTGGTTCCACCACCCCTCCGAGCACCAAAGCCGCATCTGTTTCTAAGCTTGGCGCTGACCACGTGGTTACACAGACTCCTGTAAAACGACTGTGCATTAGATCCGACAATGACCTCTCCTCCCGTGCCTCACTCTCTTCCTCCAAGATTCTTCTTCCTGCGTTTGAGAAGTGCATCCCAGGGAATGCCACCGATCCTGTTGCAGAGGATATGTGA 1005 0.4488 MCGPKSGSEKLSCTLWKNYASELVTLLDANKATEFIIVLQFAKMKFYNGVMTITNTNYTTRLMINADLEVVKKFRQKLIGLGTKHSTSVDVIGRVVRHSPSENFLSHIPYAPIHQIKQTVEKSTYVTCGTVIDIDRDHAWWYKACRQCTQGLEALTEQFYCAKCDVYSTIFVARFCIQVCVVDDSDTAIFVLFENSASKFLGLTAADIRTSMLAKIFWICSDPEIIASLALEKNIKLDALQKLTTGTGVRSGELIRNGSIVGVAGSTTPPSTKAASVSKLGADHVVTQTPVKRLCIRSDNDLSSRASLSSSKILLPAFEKCIPGNATDPVAEDM 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02746 334 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 8 207 - -
Aip07g02746 334 SUPERFAMILY Nucleic acid-binding proteins 113 209 IPR012340 -
Aip07g02746 334 Pfam Replication factor-A C terminal domain 128 209 IPR013955 -
Aip07g02746 334 PANTHER REPLICATION FACTOR A 1, RFA1 8 207 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aip07g02746 334 Gene3D - 105 234 IPR012340 -
Aip07g02746 334 CDD RPA1_DBD_C 113 208 IPR013955 -
Aip07g02746 334 Gene3D - 5 86 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02746 Aip-Chr7 112429162 112431183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02746 14 208 Core DNA Replication Machinery Family AT5G08020 25.000 2.10e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02746 - - adu:107458794 474.167