Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02730 ATGGACGCCGAGCTGAAGAACAAGGTGAAATCGGATCTGGACCAGTTCCTCAAGTCAAAGCAGTACTATCACCGGTTAGGCCGCGTTTGGAAGCGGAGTTACCTCCTCTACGGTGCCTCCGGCACGGGGAAATCGAGCTTCATCGCCGCGATGGCGAAGTTCCTTTGCTACGACATCTACGACATCGACGTTTCGAAGGTAACCGACGGATCCAATTGGAAAACTCTGCTGATGCAAACGACGAGCAAATCGATGATTGTGATCGAGGACCTAGACCGGTTACTGTCTGGAAAATCAACGGCGGTGATCAGCGTTTCGAGCATACTGAACTTCATGGACGGCATCGTTTCGTGCTGTGGCGAGGAGCGCGTGATGGTGTTCACGATGAACGGCACGAAGGATGAGGTGGATCAAGCGGTGCTGAGGCCTGGTAGGATTGACGTTCACATACACTTCCCCTTATGCGATTTCTCAACGTTCAAGATTCTCGCGAGCAGTTACCTAGGGCTTAAGGAACACAAGCTTTTCACTCAGGTGGAGGAAGTTTTCCAGACCGGGGCACGGCTTAGCCCGGCCGAAGTCGGCGAGATTATGATATCGAACCGGAATTCACCGACTCGGGCCTTGAAAACGGTTATAACGGCTTTGCAGGCTCAATCAAACGGTGGTGGTGATTCGAGGATAGCAAGAGGGGGAGGGAGGTTGAGTGAGAGCGGCTCGGGTNNNCTTCTGCGGATGGGAAGTAGGAGGAAGGAGGAGAAGGAATATTCGGGGCCCATTGAGAAGGATACTCCATCAATTGAGGGTGGTCGGGTGAATTAG 822 0.528 MDAELKNKVKSDLDQFLKSKQYYHRLGRVWKRSYLLYGASGTGKSSFIAAMAKFLCYDIYDIDVSKVTDGSNWKTLLMQTTSKSMIVIEDLDRLLSGKSTAVISVSSILNFMDGIVSCCGEERVMVFTMNGTKDEVDQAVLRPGRIDVHIHFPLCDFSTFKILASSYLGLKEHKLFTQVEEVFQTGARLSPAEVGEIMISNRNSPTRALKTVITALQAQSNGGGDSRIARGGGRLSESGSGXLLRMGSRRKEEKEYSGPIEKDTPSIEGGRVN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02730 273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 215 IPR027417 -
Aip07g02730 273 Gene3D - 151 217 - -
Aip07g02730 273 SMART AAA_5 30 156 IPR003593 -
Aip07g02730 273 Gene3D - 1 150 IPR027417 -
Aip07g02730 273 CDD AAA 31 154 - -
Aip07g02730 273 Pfam ATPase family associated with various cellular activities (AAA) 35 154 IPR003959 GO:0005524|GO:0016887
Aip07g02730 273 MobiDBLite consensus disorder prediction 246 261 - -
Aip07g02730 273 MobiDBLite consensus disorder prediction 220 273 - -
Aip07g02730 273 PANTHER BCS1 AAA-TYPE ATPASE 1 227 - -
Aip07g02730 273 PANTHER BNAANNG18710D PROTEIN 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02730 Aip-Chr7 112132019 112132840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02730 26 152 Calmodulin-binding Proteins AT3G56690 25.714 6.07e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02730 - K08900 gmx:100797983 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02730 07 112132019 112132840 Aip07g02730 07 112132019 112132840 ECH