Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02657 ATGCACGTTCTTCTTCCGGAGCCTAACTTGCCCCGCATATTTGTTCTGCTAAGGCGGTGTGTTTTTGACAGTGATGATGAGGTCCGTGATAGGGCAACACTTTATCAGAATACGCTTGGAGGCGATGGTTCAGTTGTTGAGACTGATAAAGATGTGAAGGACTTCCTCTTTGGGTCATTTGATATCCCACTTGTCAATCTTGAGACTAGTTTGAAAAATTATGTGCCTTCTGAAGAGCCTTTTGACATTAACTCAGTGCCCAGGGAGGTGAAGTCTGCACCTCTTGCAGAGAAGAAAGCACCTGGTAAAAAGCCAACTGGTTTGGGTGTTTCTAGTAGTGGGCCCCCGTCTACTGCTGATTCATATGAAAGGATGCTTTTGTCCATTCCTGAGCCTCTCTTCCACCAAGATCTTTATAGCTCCGCGGCTGCTTTAGGAGTGGGTCCAACCACCGTGTCCGACGATAAGTCACCCTCGAGATCAGCCTTCCTGGTGACGGCGTCGGCCGTGGGGAGCAAAGCAGCAAGTGGAGCAGGAAGTGGAGCAGGTGGGATTAGCTGCCAGGACTGCGGGAACCAGGCGAAGAAGGATTGCCCTCACATGCGGTGCAGGACATGCTGCAAGAGCCGTGGCTTCTATTGCCAAACCCATGTCAAGAGCACTTGGGTTCCCGCTTCCAAGCGCCGCGAGAGGTAG 696 0.5144 MHVLLPEPNLPRIFVLLRRCVFDSDDEVRDRATLYQNTLGGDGSVVETDKDVKDFLFGSFDIPLVNLETSLKNYVPSEEPFDINSVPREVKSAPLAEKKAPGKKPTGLGVSSSGPPSTADSYERMLLSIPEPLFHQDLYSSAAALGVGPTTVSDDKSPSRSAFLVTASAVGSKAASGAGSGAGGISCQDCGNQAKKDCPHMRCRTCCKSRGFYCQTHVKSTWVPASKRRER 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02657 231 Pfam Domain of unknown function (DUF702) 184 231 - -
Aip07g02657 231 PANTHER COATOMER SUBUNIT GAMMA 11 145 - -
Aip07g02657 231 MobiDBLite consensus disorder prediction 93 121 - -
Aip07g02657 231 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 186 228 IPR006510 -
Aip07g02657 231 PANTHER COATOMER SUBUNIT GAMMA 11 145 IPR017106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02657 Aip-Chr7 110082661 110087296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02657 183 231 C2H2 Transcription Factor Family AT1G75520 91.837 3.30e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Aip07g02657 DUF702 9.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02657 K17267 - gmx:100791801 222.631