LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip07g02611	ATGGAATTGAAATTCACTTCATTATCCTCAAAGGCAATCTCGCTAGCTCCACTGAAAGCACTATCATCAGAAGCTGAATCGCTTTCATTTCCATCATCGGAACCCACCAAGCAGCAGCAGCAGCAGCTTCCTCTTCGTATAATTCCCGGTGACTACGGCCTCCCATTCTTCGGAGCAATCAAGGACCGCCTTGAGTACTTCTACAGCGACGGCGGCCGCAACGAGTTCTTCAGGTCCCGCCAACAAAAGTACAACTCCACCATCTTCCGCGCCAACATGCCACCTGGCCCCTTCGTCGCCTCCGATCCAAAGGTCATCGTCCTCCTCGACGGAAAAAGCTTCCCTGTTCTCTTCGACCTTACCAAAGTAGAGAAGAAGGACCTCTTCACTGGAACCTACATGCCCTCCACCAATCTCACCGGAGGCTACCGCATCCTCTCCTACCTCGACCCTTCCGAACCAAAGCACGAGAAGCTCAAGAACCTCATCTTCTTCCTCCTCAAGTCCAGAAGCAACAACGTCATCCCTCAGTTCCATTCAAACTACACTGATCTCTTTGATTCCCTGGACATAGAACTTTCCAAGAACGGCAAAGCAAGTTTCTCCGGCAACGACCAAACGGCGTTTACGTTTCTTTGCCGCGCTTTTTACGGTACCGATCCCAAAGACACGAGCCTCGGAAGCGACGGTCCCAGCCTGGTGCAGAAATGGGTGCTGTTCAACCTCAGCCCAGAGCTTTCCCTTGGCCTCCCCAAGTTCATCGAAGATCCCATTCTTCACACGTTCCGTCTTCCCTCCATCTTCGTCAAGAGCGATTACAAGAGGCTCTATGATTTCTTCTACGGCAGCGCAGGCTTCGTCCTCGAAGAAGCCGAGCGCCAAGGCATCTCCAGGGATGAAGCGTGCCATAACATCTTATTCGCCACCTGCTTTAACACCTTCGGAGGTGTGAAGATCTTCTTCCCGGCGTTGATGAAATGGATCGGTGGCCCCGGGAACAAGGAGCTCCATTCCCGGCTGGCTCAGGAGATAAGATCAGCCGTGAAATCCAACGGCGGAGAGGTAACGATAGCGACAATGGAAGAAATGCCGTTGATGAAGTCAGTGGTGTACGAGACTTTCCGCATCGACCCTCCCGTGCCGCTTCAGTACGCGAAGGCAAAGCAAGACATGGTTATAGAGAACCATGAAAACTCTTTCCAAGTGAAGAAAGGGGAAATGCTGTTCGGGTTTCAACCGTTTGCCACGAAGGATCCAAAGATATTTGAGAGAGCAGAGGAGTTCGTTGGGGATAGGTTCTTGGGTGAAGAAGGTGAGAAGCTTCTGAAGTATGTTTTGTGGTCGAATGGGCCTGAGACGGAGTCTCCGAGTGTTAGGAACAAGCAGTGTCCCGGTAAAGACTTTGTGGTGTTGGTTTCCAGGCTTCTTGTGGTCGAGATGTTTCTCCGTTATGATTCTTTTGAGGTTGAAGCCACAAAGTCAGCACTCGGTTATGATCTTAACTTCATCTCTCTCGCCAAAGCTACCTCTTAG	1533	0.5108	MELKFTSLSSKAISLAPLKALSSEAESLSFPSSEPTKQQQQQLPLRIIPGDYGLPFFGAIKDRLEYFYSDGGRNEFFRSRQQKYNSTIFRANMPPGPFVASDPKVIVLLDGKSFPVLFDLTKVEKKDLFTGTYMPSTNLTGGYRILSYLDPSEPKHEKLKNLIFFLLKSRSNNVIPQFHSNYTDLFDSLDIELSKNGKASFSGNDQTAFTFLCRAFYGTDPKDTSLGSDGPSLVQKWVLFNLSPELSLGLPKFIEDPILHTFRLPSIFVKSDYKRLYDFFYGSAGFVLEEAERQGISRDEACHNILFATCFNTFGGVKIFFPALMKWIGGPGNKELHSRLAQEIRSAVKSNGGEVTIATMEEMPLMKSVVYETFRIDPPVPLQYAKAKQDMVIENHENSFQVKKGEMLFGFQPFATKDPKIFERAEEFVGDRFLGEEGEKLLKYVLWSNGPETESPSVRNKQCPGKDFVVLVSRLLVVEMFLRYDSFEVEATKSALGYDLNFISLAKATS	510

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aip07g02611	510	PRINTS	E-class P450 group IV signature	363	379	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Aip07g02611	510	PRINTS	E-class P450 group IV signature	416	434	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Aip07g02611	510	PRINTS	E-class P450 group IV signature	463	481	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Aip07g02611	510	PANTHER	CYTOCHROME P450 26	30	508	-	-
Aip07g02611	510	SUPERFAMILY	Cytochrome P450	44	489	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Aip07g02611	510	Gene3D	Cytochrome P450	39	510	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Aip07g02611	510	Pfam	Cytochrome P450	333	451	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Aip07g02611	510	PANTHER	ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE	30	508	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip07g02611	Aip-Chr7	108241798	108243552	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip07g02611	17	509	Cytochrome P450	AT5G42650	64.170	0.0	639

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip07g02611	K01723		-	gmx:100807192	709.909

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip07g02611	07	108241798	108243552	Aip07g02611	07	108241798	108243552	ECH

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