Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02601 ATGGATAATACTATTGTTCTCTTCACACTAAGCTTTCTTCTTGTATCTTCAAATGGCATCATGTCACAGCAGAATTATTCAGGAAACTCAGTACTAAATTGCAGCAACAACGACGCAGAGGGTCCTTCTTCAGATTTCCTATACACCTGCAATGGATTCCAAAAATCTTGCTTAGCCTTTCTCATATTCAAATCCCAAACTCCTCACAACACCATTGCCACAATCTCCAACCTCACTTCCTCAAACCCAGAGGACCTTGCAAGGTTCAACAACGCCTCTCATTCCACACTGTTCCGAACCGGCAAAGAAGTCATTGTCCCTCTCAATTGTTCTTGTCCAACCAGAGAACATGATGATGATTATGATGAGTACTATCAAGCCCAAACCACATACGTTCTGCCAAAAGATCCAACATATTTTACAACAGCAAATGATACCTTTCAGGGATTAACCACGTGCGATTCTCTCCAGCGTTACAATACTTATGGGGTTCTTGATTTGCATCCTGGCATGGTGTTGCACGTGCCCCTCAGATGCGCTTGTCCGACGGCGCGTCAAGCCGGTAGCGGCACCAAGTATTTGCTGACCTACTCGGTTAATTGGGGTGATAACATCTCTAATATCGCAGCACGGTTCCATGTCAACGCAAGTAGTATGGTTGATGCCAATGGTTTCTCCTCAGAAAATGAAATGCTCTATCCATTCACAACTGTCCTGATTCCATTAACAAGTGAACCCAACAGCACAATAACCAAAGTTCAAAATGGTCAACCACCTTCTCCAACTACTCTTTACACTGTAAGAAAGGATAAGAAAAAGACAAAAAGAAAAAGAATCATAGTTGCTCTTACTTCCTCGGCGAGCTTCTTGTTTTTTCTGTTTGTCGTTTTATCTCTAGTGTTTGTGCGTAGAAAGAGATTAGAAATTTTCTTCAGGGGAGATAGAAGAGGCAGAACAAAGCAAGTGTTTTCAGAACAAATACGTGAAGGGTTAGCAAGCATTGAGCTTCTTTCCAAAGTGTACAAGTTTGATGAAATTAAAGAAGCAACTGAGAATTTCAGTGCAAGCAACAGAATCAAAGGCTCTGTCTACCGTGGGGTATTTGGTAAGGAGAGGGAAATCATGGCGATCAAGAAGATGAATTTGGGTGCCTCTAAAGAAGTGAATTTGTTAGGAAGGATCAATCACTTCAACCTGATAAAGCTGGAAGGTTACTGTGAAAAAGATGGATCCTTCTATCTTGTTTTTGAGTACATGGAAAATGGTTGTTTGAGAGAATGGCTTGGGAGAAGAAACAGAACCATAGAACACCAATGTTGGAGAAAGAGGATTCGGATTGCTGTGGATGTTGCAAATGGACTTGAGTATCTTCATAACTTCACAGATCCTTGCTATGTTCACAAGGCCATAAACACTGATAATATATTGCTAAATAAAGATCTAAGGGCCAAGATAGCGAATTTCACTCTGGCTAAAGAATCAGATAGAGAAGTAACAAGCTCTTGTTCTTATTACACATCCCATGTTGTGGGAACCAGGGGTTATATGGCTCCAGAGTATCTTGATTCAGGGAGAGTCACATCGAAGATGGATGTGTATGCGTTCGGAGTGGTGCTGTTGGAATTGATCACCGGCAAAGATTCTATTATTGTGCAGGATGATGGAAGTGAGACGATGCTTTCATCAATCATATTGAATCTCATTGACAAAGATGATGCAGAAGAGAAACTCGGTTTGTTCATTGATCCTAGTCTCGTGGGAAACTGTGAGAAGGTCTATGCAATTCAGCTAGTTAACCTAAGCCTAGCATGCTTGGTTGAAGAACCTTCAAGGAGACCAAACATGGCAGAAGTGGTCTCGAGTTTGCTTAGAATATATACAGAAATTGAGACAAGAACGTCACCCTGCCGCATCAATGACAGTGGAAGCACGGAGAGGTGA 1941 0.4168 MDNTIVLFTLSFLLVSSNGIMSQQNYSGNSVLNCSNNDAEGPSSDFLYTCNGFQKSCLAFLIFKSQTPHNTIATISNLTSSNPEDLARFNNASHSTLFRTGKEVIVPLNCSCPTREHDDDYDEYYQAQTTYVLPKDPTYFTTANDTFQGLTTCDSLQRYNTYGVLDLHPGMVLHVPLRCACPTARQAGSGTKYLLTYSVNWGDNISNIAARFHVNASSMVDANGFSSENEMLYPFTTVLIPLTSEPNSTITKVQNGQPPSPTTLYTVRKDKKKTKRKRIIVALTSSASFLFFLFVVLSLVFVRRKRLEIFFRGDRRGRTKQVFSEQIREGLASIELLSKVYKFDEIKEATENFSASNRIKGSVYRGVFGKEREIMAIKKMNLGASKEVNLLGRINHFNLIKLEGYCEKDGSFYLVFEYMENGCLREWLGRRNRTIEHQCWRKRIRIAVDVANGLEYLHNFTDPCYVHKAINTDNILLNKDLRAKIANFTLAKESDREVTSSCSYYTSHVVGTRGYMAPEYLDSGRVTSKMDVYAFGVVLLELITGKDSIIVQDDGSETMLSSIILNLIDKDDAEEKLGLFIDPSLVGNCEKVYAIQLVNLSLACLVEEPSRRPNMAEVVSSLLRIYTEIETRTSPCRINDSGSTER 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02601 646 Pfam LysM domain 197 241 IPR018392 -
Aip07g02601 646 Gene3D Phosphorylase Kinase; domain 1 317 418 - -
Aip07g02601 646 SUPERFAMILY LysM domain 195 241 IPR036779 -
Aip07g02601 646 ProSiteProfiles Protein kinase domain profile. 353 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02601 646 SMART LysM_2 196 241 IPR018392 -
Aip07g02601 646 CDD LysM 196 240 IPR018392 -
Aip07g02601 646 Pfam Protein kinase domain 361 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02601 646 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 4 633 - -
Aip07g02601 646 ProSiteProfiles LysM domain profile. 195 240 IPR018392 -
Aip07g02601 646 Gene3D Transferase(Phosphotransferase) domain 1 419 640 - -
Aip07g02601 646 Gene3D LysM domain 195 253 IPR036779 -
Aip07g02601 646 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 4 633 - -
Aip07g02601 646 SUPERFAMILY Protein kinase-like (PK-like) 332 622 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02601 Aip-Chr7 107876286 107878236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02601 10 625 Receptor kinase-like Gene Family AT2G23770 37.421 1.28e-120 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aip07g02601 Pkinase 5.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02601 - - aip:107641252 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02601 07 107876286 107878236 Aip07g02601 07 107876286 107878236 ECH