Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02599 ATGTACCACCCTTCATATATTCTTGACTTTGCCTCCCAAACCCTGCACCCCATCCAGCTACTCTTTCTTTTTTCTCCACATTTTTTAATTGATATTTTCATTACTAGAGGGAGACCAAAAGCGTGTTTGAAACCTCATTCTCCACATTCTCCAATTATAAGCCACCTCATAGATCCCAAAATTCAAACCCAGCTCAGAGTCTCACACCCACACGCCATTTTCCATTCTCAAAAGATTAACAAAACTATGCAATCTAGATTAACAAAACCAAAAACATTACTACTCTTCTTCACAGGTCTCTTATTGCTTCCATGTTCATGTTTATGCTCTTCCACCACCAACAAAGCCAAAAACGCCACCATTATTCCCCATCAGTTCAAGGAAGCACCTCAATTCTACAACTCCCCGGACTGCCCCTCCGTCATGGACACCGACAGCGATGACACTAACACCGATACGGACACGGACACGTACATATGCTCGGAGGAAGCAGTACACGTGGCAATGACTCTAGACACAACATACATCCGAGGATCCATGGCTGCAATCCTTTCAGTCCTCCAACACTCTTCCTGCCCACAAAACATCTTCTTCCACTTCGTCTGCTCCTCCAACGCGTCACTCCTACGCGCCGCCATCTCCAACTCCTTCCCTTACCTCAAGTTCCACCTTTATCATTTCGACAACGCCACCGTCTCCGGCCTCATCTCCACCTCAATCCGCTCCGCACTTGACTGCCCTCTTAACTACGCCCGCAGCTACCTTGCCAATCTCCTTCCACTCTGCGTCCGCCGCGTCGTCTACTTGGACTCCGACCTCATACTCGTCGACGACATTGCGAAACTCGCAGCCACCCCACTAGGCCAAACGGCGGTTCTTGCAGCGCCGCAATACTGCAACGCGAATTTCACAGCATACTTCACACAAACATTCTGGTCGAATCCTTCTCTGTCGCTTACATTCGCGAACAGAGAGCCTTGCTACTTCAACACAGGGGTCATGGTGATCGATCTGGATCGGTGGCGCCATGGAGATTACACGAGGAAGATCGAGGAGTGGATGGAGGTGCAGAAGAGGACGAGGATCTACGAGCTTGGTTCTCTGCCACCGTTTCTTCTTGTTTTCGCTGGAAATATTGCTACTGTGGATCATAGGTGGAACCAGCATGGTTTGGGTGGTGACAATTTTCGTGGTTTGTGCAGAGATCTGCACCCTGGTCCTGTGAGTTTGTTGCATTGGAGTGGCAAAGGTAAGCCATGGGTGAGGTTGGACGCTAATAGGCCTTGCCCTTTGGATGCTCTTTGGGCACCTTATGATCTGTTGCTCACTCCATTTTCTCTTGATTCTTGA 1350 0.4896 MYHPSYILDFASQTLHPIQLLFLFSPHFLIDIFITRGRPKACLKPHSPHSPIISHLIDPKIQTQLRVSHPHAIFHSQKINKTMQSRLTKPKTLLLFFTGLLLLPCSCLCSSTTNKAKNATIIPHQFKEAPQFYNSPDCPSVMDTDSDDTNTDTDTDTYICSEEAVHVAMTLDTTYIRGSMAAILSVLQHSSCPQNIFFHFVCSSNASLLRAAISNSFPYLKFHLYHFDNATVSGLISTSIRSALDCPLNYARSYLANLLPLCVRRVVYLDSDLILVDDIAKLAATPLGQTAVLAAPQYCNANFTAYFTQTFWSNPSLSLTFANREPCYFNTGVMVIDLDRWRHGDYTRKIEEWMEVQKRTRIYELGSLPPFLLVFAGNIATVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLLTPFSLDS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02599 449 Pfam Glycosyl transferase family 8 166 422 IPR002495 GO:0016757
Aip07g02599 449 SUPERFAMILY Nucleotide-diphospho-sugar transferases 165 440 IPR029044 -
Aip07g02599 449 PANTHER HEXOSYLTRANSFERASE 107 449 - -
Aip07g02599 449 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 166 429 IPR029044 -
Aip07g02599 449 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 107 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02599 Aip-Chr7 107827620 107829557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02599 114 449 Glycosyltransferase AT1G19300 75.444 6.85e-175 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02599 K20893 - gmx:100818099 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02599 07 107827620 107829557 Aip07g02599 07 107827620 107829557 ECH
Aip05g00747 05 9615825 9616792 Aip07g02599 07 107827620 107829557 ECH
Aip06g03881 06 136504366 136505736 Aip07g02599 07 107827620 107829557 PCT