Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02588 ATGGAATCTCAAGTTTGTGAATTTTATGCCAAATATGTCAAGTGCTATGGATTTGTGTCTCGAAAAAACTTGAAGACGGTGGATGCTAATGGCAACATTAATACAAGACAATTGGTTTGTAATAAAGCAGGAGAAAGACATTGGAAGCACCTTAAAAGGGACAATCGACAAAGAGAGCATAGGGTAATTACTCGTGTCAATTGCAAGGCTAGGATTCGTTTCATTCGTCACTATAAGACGGGTAAATGGAAAGTCAGTATCTTTGAGAGTGAACACAATCATCCACTGTGTCCACCTAAGTACAAACATCTTATTGCTGCGAATCGTAGGCTTAATGACGCCATAAAACACAAGCAGATAGCTTGCGAGCATGTGGTGTTAAAACCTGTCACATAA 396 0.3914 MESQVCEFYAKYVKCYGFVSRKNLKTVDANGNINTRQLVCNKAGERHWKHLKRDNRQREHRVITRVNCKARIRFIRHYKTGKWKVSIFESEHNHPLCPPKYKHLIAANRRLNDAIKHKQIACEHVVLKPVT 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02588 131 Pfam FAR1 DNA-binding domain 7 97 IPR004330 -
Aip07g02588 131 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02588 Aip-Chr7 107531659 107532054 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g02588 FAR1 1.4e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02588 - - adu:107459133 229.565