Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02540 ATGGAATCTCCAAATCTCCATCAACATCCTTCTTCATCTTCCTCATCATCATCATATGGATCCACCACCCACCATTCTTGGACTCCAAATATCACTTTCCACATCCAAGAAGATAACAATAATAATATTAATATTGGGGTCCCTCTCATCCAAGATCATCACCATCACTTATGGACGACAACTACAACAACTACTAGTAGTGGTGATGATAATACTGCACAACCAAGCTGCTTAAGCTTAAACACCACCAACCACATCACTATTAATCATAATATGCTAAACTCTCATCATACACCTCCTCCTCCTTCTTCAACCGTCGAATTCTCAACACACGATGATGACAAGCTCTTGCTCAAGACGTTTTTCTCTGCGCAAGATTTCTACTCCAATACCGATACTACTACTACTACTACTTTCTGTGGAGTACCTTCTAGTAGTAGACGAAACTTTAGTCACATTTATCCCACCATAAATATCTCTAATAATATCAACAACCACTCATCACCATCACCATCATCTTCTAGTAATAATATGACCTCGCACTCCTTCGATCTACCAGCTTTCATGACAACTACCACTCATGGCGGCGGTGCTGCTGCACATCAACAAGTAGATCTTGGTCTTGCTACATTTTCCGACAACCATCTTTCTTTTCATCTTGATCATCATCATAGCCAGCACCACCGCCCTACTCACGCCTCCTCGCCGCCCTGCAGTAACTCTACTACTTCCACTACTGCTAATAATAACAGTCATCCATCACAATACTTCTCCAATGGCACTGTGGACACAAAGAGACCCTGCACTTCGATAATGGACACAAAGGCTTCTCAATCTCTAACAGCATCCAAGAAATCACGATCCGAATCGCGCCCTTCATGCCCTCCCTTTAAGGTTAGGAAAGAGAAATTAGGAGATAGGATTGCGGCTCTTCAACAGTTGGTGGCTCCTTTTGGTAAGACCGACACAGCATCCGTACTTATGGAAGCAATCGGATACATAAAATTCCTTCAAAGCCAAGTAGAGACACTGAGCGTTCCATACATGAAGCCAACACAGAACCAAACCAACTCCAGAATGATGCAAGGGGTTTCAACCATAGGCGGCGGAAATGGGGAACCAAAGCAAGACCTTCGAAGTCGAGGCCTTTGTCTGGTGCCATTATCATGCATGTCTTACATAGCAGGTGATGCCAGCAATGACGCGTGGCAACAATCAAACTTTGGAGGAGCAACTTAG 1239 0.4366 MESPNLHQHPSSSSSSSSYGSTTHHSWTPNITFHIQEDNNNNINIGVPLIQDHHHHLWTTTTTTTSSGDDNTAQPSCLSLNTTNHITINHNMLNSHHTPPPPSSTVEFSTHDDDKLLLKTFFSAQDFYSNTDTTTTTTFCGVPSSSRRNFSHIYPTINISNNINNHSSPSPSSSSNNMTSHSFDLPAFMTTTTHGGGAAAHQQVDLGLATFSDNHLSFHLDHHHSQHHRPTHASSPPCSNSTTSTTANNNSHPSQYFSNGTVDTKRPCTSIMDTKASQSLTASKKSRSESRPSCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQSQVETLSVPYMKPTQNQTNSRMMQGVSTIGGGNGEPKQDLRSRGLCLVPLSCMSYIAGDASNDAWQQSNFGGAT 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02540 412 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 298 351 IPR036638 GO:0046983
Aip07g02540 412 PANTHER OS01G0105700 PROTEIN 66 397 - -
Aip07g02540 412 MobiDBLite consensus disorder prediction 231 290 - -
Aip07g02540 412 Gene3D - 298 362 IPR036638 GO:0046983
Aip07g02540 412 CDD bHLH_AtbHLH_like 295 345 IPR045239 -
Aip07g02540 412 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 66 397 - -
Aip07g02540 412 MobiDBLite consensus disorder prediction 221 298 - -
Aip07g02540 412 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 288 337 IPR011598 GO:0046983
Aip07g02540 412 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02540 Aip-Chr7 105747025 105750620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02540 91 393 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 44.762 4.74e-58 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02540 - - aip:107610095 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02540 07 105747025 105750620 Aip07g02540 07 105747025 105750620 ECH