Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02538 ATGGCAACTCAGGTTGAGCCTCCAAATGGGATCAAGATTGAAGGGAAGCATTATTATTCCATGTGGCAAACCCTTTTCGAGATTGACACGAAATATGTCCCCATCAAACCTATTGGCCGAGGAGCATACGGAATTGTTTGCTCTTCTGTGAATAGAGAGACCAATGAGAAAGTTGCAATCAAGAAGATACAGAACGCCTTCGAAAATCGCATTGATGCGCTGAGAACTCTGCGTGAACTGAAGCTTCTTCGGCACCTTCACCATGAAAATGTAATTGCTTTAAGAGACATCATGATGCCTACTAACAAGAGCAATTTTAAGGATGTCTATCTGGTGTATGAACTCATGGATACAGATCTGCATCAAATTATTAAGTCTTCTCAAGCATTATCTAACGATCACTGTCAATATTTCCTCTTTCAGTTGCTTCGGGGCTTAAAATATCTTCACTCGGCCAACATTCTTCATCGTGACCTGAAACCCGGGAATCTTCTGATCAATGCAAATTGTGATCTAAAAATATGTGATTTTGGTTTAGCACGCACCAACAGCAGCAAGGACCAGTTTATGACTGAGTATGTTGTCACCCGATGGTATAGAGCTCCAGAGCTCCTACTCTGCTGCGACAACTATGGGACGTCTATTGATGTTTGGTCTGTGGGGTGCATCTTTGCAGAGCTTCTTGGACGGAAGCCTATTTTCCCAGGTTCGGAATGTCTCAACCAGCTAAAACTGATTATCAACATCCTTGGCAGTCAAAGGGAGGAAGACATCGAATTCATCGATAATCCAAAGGCAAAGAAGTTCATCAAATCTCTTCCATATTCTCCGGCAACCCCCTTTTCCCGACTCTACCCACAAGCCCCCCCATTGGCAATCGATCTGCTGGCCAAGATGCTTGTTTTTGATCCAACTAAGAGAATCAGCGTCGCTGAAGCGCTGCAACACCCTTACATGGCCCCTTTGTATGATCCTAATTCTGATGCCCCTGCCATCATTCCGATTGATCTTGACATCGATGAGGATCTTGGAGAGGAGATGATTAGGGAGATGATATGGAGGGAAATGCTTCATTATCATGCTGAATCTGCTATGGGAAATGCACCCTTGTGCTCATAA 1119 0.4397 MATQVEPPNGIKIEGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIQNAFENRIDALRTLRELKLLRHLHHENVIALRDIMMPTNKSNFKDVYLVYELMDTDLHQIIKSSQALSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNSSKDQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIINILGSQREEDIEFIDNPKAKKFIKSLPYSPATPFSRLYPQAPPLAIDLLAKMLVFDPTKRISVAEALQHPYMAPLYDPNSDAPAIIPIDLDIDEDLGEEMIREMIWREMLHYHAESAMGNAPLCS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02538 372 Gene3D Phosphorylase Kinase; domain 1 19 355 - -
Aip07g02538 372 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Aip07g02538 372 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Aip07g02538 372 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02538 372 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Aip07g02538 372 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02538 372 CDD STKc_TEY_MAPK 26 360 - -
Aip07g02538 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Aip07g02538 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 362 - -
Aip07g02538 372 SUPERFAMILY Protein kinase-like (PK-like) 24 325 IPR011009 -
Aip07g02538 372 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02538 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02538 Aip-Chr7 105424505 105427329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02538 1 370 MAP Kinase Gene Family AT1G10210 83.514 0.0 661
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Aip07g02538 Pkinase 1.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02538 K20535 - gmx:100798863 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02538 07 105424505 105427329 Aip07g02538 07 105424505 105427329 ECH