Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02532 ATGAGACAAGCTTGGAGGCCTCAGAGGGGTCTCCCCGAAACCTCTGTCTCAATACTTCGCGCTTGGCTTTTCGAACATTTTCTTCACCCGTATCCCAAGGATTCAGAGAAAATCATGCTGGCAAGACAGACAGGCCTGACCAGAAACCAGGTGGCAAATTGGTTCATCAATGCACGGGTGCGGCTATGGAAGCCGATGGTTGAAGAAATGTATAAAGAAGAGTTTGGTGATTCTGATAACATAAGCTGCAATATTCGATCCGAAGGCATTGTGAAAAGTAAAAGAGATGATGCTCAAGCCTCTGATAACAAAGGGGAAGATGATTCACAAGACAATTTAGCAACCCTTGCTGATAGTGTCCAACAAGAAGGGCATTTTCATAAACATGCATCATGTTCCATGGATGAGAACAACAATAATGGGGTTTATAGTTGTGGAAGCATAATGGGTTGTAGTACTAGTCCTGCTGCATATGATTTTGCAGAGTTGGGTAACTTTACATCTACCATGGGTGGCCACGTGTCTCTTGCATTGGAATTGAGGAACTGTGAAAGGGATGGGTTTGGTGGCATGTCTGATAATGATGGCATCCACAAGAAAAGACGGTCACAAGCTGACAATCCTAGAACTGAGAGTGTGCAAAAGATAGCACACTTTCCTCCTCTTTTTGCAGATCACAACAATCCAAATGAACAGCACATTTTTAACCTATGGAGGCGAGGCTCTATAATATCCTGTGAATGTGATAAGAGAAAAAGAGAGATACTATACTATGCACTGTTTAAGCTGCTTTTGAGTCTCCCAAAAATTTATATAACTGCAGGTGCAGGCAAGGACTAA 840 0.4274 MRQAWRPQRGLPETSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSDNISCNIRSEGIVKSKRDDAQASDNKGEDDSQDNLATLADSVQQEGHFHKHASCSMDENNNNGVYSCGSIMGCSTSPAAYDFAELGNFTSTMGGHVSLALELRNCERDGFGGMSDNDGIHKKRRSQADNPRTESVQKIAHFPPLFADHNNPNEQHIFNLWRRGSIISCECDKRKREILYYALFKLLLSLPKIYITAGAGKD 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02532 279 Pfam Homeobox KN domain 22 61 IPR008422 GO:0003677|GO:0006355
Aip07g02532 279 CDD homeodomain 5 66 IPR001356 GO:0003677
Aip07g02532 279 MobiDBLite consensus disorder prediction 191 208 - -
Aip07g02532 279 Gene3D - 2 80 - -
Aip07g02532 279 ProSiteProfiles 'Homeobox' domain profile. 2 65 IPR001356 GO:0003677
Aip07g02532 279 MobiDBLite consensus disorder prediction 92 111 - -
Aip07g02532 279 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 1 200 - -
Aip07g02532 279 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 200 - -
Aip07g02532 279 SMART HOX_1 5 69 IPR001356 GO:0003677
Aip07g02532 279 MobiDBLite consensus disorder prediction 191 210 - -
Aip07g02532 279 SUPERFAMILY Homeodomain-like 6 73 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02532 Aip-Chr7 105345726 105348258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02532 1 81 Homeobox Transcription Factor Family AT1G19700 83.951 1.10e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Aip07g02532 Homeobox_KN 6.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02532 - - aip:107610078 424.091