Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02491 ATGGCTGATTCAGGATCCTCATCGTCAAGGAGGATGTGGTGCTCCATCCCAGAGAAGCTTCAACTACATGGTGCCATGCTGGCACTCCAGTTTGGCTATGCTGGCTTTCATGTTGTCTCAAGAGCTGCCCTTAACATGGGCGTTAGCAAACTTGTCTTCCCAGTCTACCGCAACATCATTGCTTTTCTCCTCCTCCTTCCCTTTGCATACTTCTTGGAGAAGAAGGAGAGGCCTGCCATTACTTTAAACTTCTTGCTGCAGTTCTTTCTTCTGGCACTTGTTGGGATTACAGCGAACCAAGGGTTTTACTTGCTGGGATTGGACAACACATCTCCAACATTTGCATCTGCAATACAGAACTCTGTCCCAGCCATTACATTTCTCATGGCAGCCATACTCAGGATAGAGAAAGTGCGGCTCGACAGAAAAGATGGCGTGGCAAAGGTAGCCGGAACAGTATTCTGTGTGGCGGGGGCGTCCGTCATAACACTCTACAAGGGTCCAACCATCTACAGCCCAGAACCACCGCTGCAGACCGCAGCCATGAGCTTAGGGGCGGCAGCAGAAGAGGGAAAGAACTGGACCCTGGGATGTGTCTACCTCATTGGCCATTGCTTGTCTTGGTCCGGTTGGCTCGTCCTGCAGGCTCCGGTTCTGAAGAAGTACCCGGCTCGGCTCTCCGTGACTTCCTACACGTGCTTCTTTGGACTGTTGCAATTCCTTGCCATTGCTCTGGTGGTTGAAAGAGATGTGAATGCTTGGATTTTCCAATCAGGTGCTGAAGTCTTCACTATTGTATACGCGGGAGTGGTTGCTTCCGGCATAGCCTTTGCGGTGCAGATATGGTGCATTGACAGAGGTGGCCCTGTGTTCGTGGCGGTGTATCAGCCAGTCCAGACTCTTGTCGTCGCTGTCATGGCTTCCCTTGCTTTGGGTGAACAGTTCTACTTAGGCGGGATCATTGGAGCAGTTTTGATCGTAGTGGGTCTGTACCTAGTCCTGTGGGGTAAATCCGAAGAGAAGAAATTTGCATCTCAATCGCAACATGTCATTGCTTCTGGTCCAGAGCACAGTAGCATCAGGCCCGCAAGCCATGCCAAACCATCTCTTACTCAGCCTCTTCTTCCTTCCTCAACGGAAAATGTTTGA 1149 0.5083 MADSGSSSSRRMWCSIPEKLQLHGAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIAFLLLLPFAYFLEKKERPAITLNFLLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAILRIEKVRLDRKDGVAKVAGTVFCVAGASVITLYKGPTIYSPEPPLQTAAMSLGAAAEEGKNWTLGCVYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLLQFLAIALVVERDVNAWIFQSGAEVFTIVYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAVMASLALGEQFYLGGIIGAVLIVVGLYLVLWGKSEEKKFASQSQHVIASGPEHSSIRPASHAKPSLTQPLLPSSTENV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02491 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 338 - -
Aip07g02491 382 PANTHER WAT1-RELATED PROTEIN 14 358 - -
Aip07g02491 382 PANTHER WAT1-RELATED PROTEIN 14 358 IPR030184 GO:0016021|GO:0022857
Aip07g02491 382 MobiDBLite consensus disorder prediction 364 382 - -
Aip07g02491 382 MobiDBLite consensus disorder prediction 354 382 - -
Aip07g02491 382 Pfam EamA-like transporter family 27 163 IPR000620 GO:0016020|GO:0016021
Aip07g02491 382 Pfam EamA-like transporter family 196 334 IPR000620 GO:0016020|GO:0016021
Aip07g02491 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02491 Aip-Chr7 104392892 104395211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02491 1 382 Nodulin-like Gene Family AT1G75500 74.300 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02491 - - gmx:100798686 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02491 07 104392892 104395211 Aip07g02491 07 104392892 104395211 ECH
Aip06g00092 06 887656 889783 Aip07g02491 07 104392892 104395211 PCT