Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02488 ATGATGAATGAAGGATGCCTTCCCACGATGGATCTGCTACGATCGGAGCCTATGCAGCTAGTTCAGTTGATCATTCCCATCGAAGCAGCTCATCGATCCATCTCTTACCTCGGTGATCTCGGTCTCGTTCAATTCAAAGATCTAAATGCAGATAAAAGCCCGTTCCAACGGACATATGCTACTCAGATTAAAAGGTGCGGGGAAATGGCTCGCACGCTACGGTTATTTAAGGAACAAATGACAAAGGCGGGTGTATCTCCCTCGATGCAGAATACCAGAAATAGTGTTATTGATCTGGATCATTTGGAGGTTGTTAAACTTAAAGAACTTGAAGCTGATCTGCTTGAGAATAAGGCAAATAATGAGAAGTTGCAACACACCTACAACGAGCTGGTAGAATATAAGCTTGTTTTGGAGAAGGTTGGTGAATTTTTCTCTTTAGCACAAAACATTGCTGTAGCTCAGCAGAGGGAGCATGATGTCCAAACAACTGTTAAAGGGTCGATTGACAGCCCATTATTACTAGAACAAGAGACAACAGCGTTTTCGGCTAAGCAGGTTAAGCTGGGTTTTATCAGTGGTCTTGTTCCGAGAGAAAAATCAATTCCTTTTGAAAGAATCTTGTTTCGTGCTACAAGGGGGAATGTATTTATGAAGCAAGCCGTGATTGATAAACCTGTGCTCGATCCAATATCAGGAGAGAAGGTTGATAAAAATGTATTTGTTGTATTTTATTCTGGGGAGAGAGTTAAAAGTAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGCTATCCTTTCTCAGATGACCTGGGGAAACAATTTCAGATGATAAGAGAGGTGTCAGGGAAACTTTCAGAGTTGAAGACTACCATCGATGTAGGATTGCTTCATTGGAACACTTTACTCCAGTCTATTGGACATCAGTATGAGCAGTGGAGCCTTCTGTTGAGGAGGGAAAAAGCCGTTTATCACACCCTAAATATGCTTAGCTTTAATGTGACGAGAAAATGTCTCCTTGCAGAAGGTTGGTGTCCTGTTTTTGCGACAAGTCAGATTCAGAAAGTATTGCAGCGGGCAACTAGGGATTGTAACTCCCAGGTTGGAGCCATATTTCAGGTTCTCCAGACAAAGGAATCACCGCCGACTTATTTTTACACAAACAAATTTACTTCTTCTTTTCAAGAAATTGTAGATGCTTATGGAGTTGCCAAGTACCAGGAGGCAAATCCAGGTGTATACACAATCATCACCTTTCCGTTCCTTTTCGCTGTCATGTTTGGTGACTGGGGCCATGGCATATGCATATTGCTGGCTTCTTTGTACCTCATAATCAGAGAGAAAAAGTATTCAAGTCAGAAACTTGGAGACATCATGCAAATGGCATTTGGCGGACGCTATGTCATTGCGATGATGGCAATCTTCTCAATCTACACTGGCTTCATATACAATGAATTCTTCTCTGTTCCGTTTGCTATATTTGCACCATCTGCCTATGCATGCCGTGATCCATCATGCAGGGATGCTTCTACAACAGGTTTAATAAAAGTGCGAAACACCTACCCATTTGGTCTGGATCCTGTATGGCATGGCACTCGGAGTGAACTTCCATTTCTTAACTCTTTGAAGATGAAAATGTCTATTTTACTGGGAGTATGCCAGATGAATCTTGGAATCATATTGAGTTATTTTAATGCAAAATACTTTGGAAGCAGCATAGATGTTTGGCACCAATTTGTTCCCCAGATGATATTCTTAAATAGTCTATTCGGCTACCTTTCGCTCATCATAATTGTTAAATGGTTTACTGGATCACAGGCTGACTTATATCATGTGATGATATACATGTTCTTAAGTCCAACTGATGATTTGGGTGAAAACCAGCTCTTTGTTGGCCAGAAGTTTCTTCAACTTGGATTATTATTGTCAGCACTTGTAGCTGTACCATGGATGTTATTACCAAAGCCCTTTCTTCTGAAGAAACAACACGAAGAAAGGCATCAAGGTCAATCTTACTCTCTGCTCCACAGTACGGATGATCCTATTGAATCAGGGCCACATAGCCCTCACGGCCATGAGGAGTTTGAGTTCAGTGAAGTTTTCGTGCACCAACTTATACATACAATAGAATTTGTGCTTGGTGCTGTGTCTAATACAGCTTCATATCTACGTCTATGGGCCCTCAGTCTGGCTCATTCAGAGTTGTCGAGTGTCTTCTATGACAAAGTTCTACTTATGGCCTGGGAGTTTAATAATACCGTTATTCTTATTGTTGGCGTTATTGTTTTCATATGTGCAACTGTTGGTGTATTACTGCTTATGGAAACTCTAAGCGCTTTCTTGCATGCTTTGAGACTTCACTGGGTAGAGTTTCAGAATAAATTTTATGTGGGAGATGGTTACAAGTTTGCCCCATTTTCATTTGCGTTACTTATTGATGAGGATGAACTGTAG 2457 0.409 MMNEGCLPTMDLLRSEPMQLVQLIIPIEAAHRSISYLGDLGLVQFKDLNADKSPFQRTYATQIKRCGEMARTLRLFKEQMTKAGVSPSMQNTRNSVIDLDHLEVVKLKELEADLLENKANNEKLQHTYNELVEYKLVLEKVGEFFSLAQNIAVAQQREHDVQTTVKGSIDSPLLLEQETTAFSAKQVKLGFISGLVPREKSIPFERILFRATRGNVFMKQAVIDKPVLDPISGEKVDKNVFVVFYSGERVKSKILKICDAFGANRYPFSDDLGKQFQMIREVSGKLSELKTTIDVGLLHWNTLLQSIGHQYEQWSLLLRREKAVYHTLNMLSFNVTRKCLLAEGWCPVFATSQIQKVLQRATRDCNSQVGAIFQVLQTKESPPTYFYTNKFTSSFQEIVDAYGVAKYQEANPGVYTIITFPFLFAVMFGDWGHGICILLASLYLIIREKKYSSQKLGDIMQMAFGGRYVIAMMAIFSIYTGFIYNEFFSVPFAIFAPSAYACRDPSCRDASTTGLIKVRNTYPFGLDPVWHGTRSELPFLNSLKMKMSILLGVCQMNLGIILSYFNAKYFGSSIDVWHQFVPQMIFLNSLFGYLSLIIIVKWFTGSQADLYHVMIYMFLSPTDDLGENQLFVGQKFLQLGLLLSALVAVPWMLLPKPFLLKKQHEERHQGQSYSLLHSTDDPIESGPHSPHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLMAWEFNNTVILIVGVIVFICATVGVLLLMETLSAFLHALRLHWVEFQNKFYVGDGYKFAPFSFALLIDEDEL 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02488 818 Pfam V-type ATPase 116kDa subunit family 36 809 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aip07g02488 818 PIRSF ATP6V0A1 8 818 IPR026028 GO:0000220|GO:0046961
Aip07g02488 818 Coils Coil 105 127 - -
Aip07g02488 818 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 4 817 - -
Aip07g02488 818 PANTHER VACUOLAR PROTON ATPASES 4 817 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02488 Aip-Chr7 104209302 104216293 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02488 10 817 Primary Pumps ATPases(2) AT4G39080 74.815 0.0 1254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02488 K02154 - gmx:100805813 1359.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02488 07 104209302 104216293 Aip07g02488 07 104209302 104216293 ECH