Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02478 ATGGATGTTGATTCAGAACCACTCAATTCAGAAGAGAATGTTGAAGATTGCTTGATGACCGATGTGGAAGAGAATGTAAATTGCACTTGTGATTGCGGTTGCAGCAGTAGCAAGTGTGTTGTTGTGACGGCCGATGATATTATAAACCAGACATTTGAAACATCGGATGCAGCTTATCACTTGTATGTGCGTTATGCAAGGAAGAGGGAGCATAAAGCGCTGACTCATACGGGTTGTGAAGCCATGCTTGCGGTGTACTTTGACACCAAAACTTCAGCTTGGAGAGTTAAAAAATTAGTTGAGAAGCACAACCACGATCTTGTCCCCCAATGCTTGGTACACCTAATTCCAAACCACTGTGGGATGAATGAGGCTCAAAAAGCTCAGGCAAACACCATGCACGATAATGGTCTTCCAAGCGCTAAGATAATGGGACTAATGGTAGGCCAAGCCAGGGGTTATGCTAATGTCGGGTTCACAAAGAAGGATCTGGATAACCACATTGAAAGAACTCGTCGTGCAAAGCTCATTGGTGGGGATTCTAATGCAACAATTAGCTATCTACTTGGAAAAGCCGATGTTGACCCCATGGCCATGGCAAGGTACAGTGCTACTGATGAAAGTCGGCTGGCGAATTTATTTTGGGCAGATGGCATTTGTAGGGCGGATTATTAG 675 0.4459 MDVDSEPLNSEENVEDCLMTDVEENVNCTCDCGCSSSKCVVVTADDIINQTFETSDAAYHLYVRYARKREHKALTHTGCEAMLAVYFDTKTSAWRVKKLVEKHNHDLVPQCLVHLIPNHCGMNEAQKAQANTMHDNGLPSAKIMGLMVGQARGYANVGFTKKDLDNHIERTRRAKLIGGDSNATISYLLGKADVDPMAMARYSATDESRLANLFWADGICRADY 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02478 224 PANTHER OS02G0262500 PROTEIN 58 224 - -
Aip07g02478 224 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 58 224 IPR031052 GO:0006355
Aip07g02478 224 Pfam FAR1 DNA-binding domain 64 109 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02478 Aip-Chr7 103813438 103814240 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g02478 FAR1 4.5e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02478 - - aip:107627763 420.239