Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02472 ATGGCACTAACAACGGCTACATTCCTCATCTTCACGGCTGTGGCGTACTTCACCACAATAACCATCACCTTAACGTGCGCCCAACAAACTAGGAGCACCGTAACCATCGCCGAGATCGAGGCCTTAACGGCGTTTAAGATGAACCTCCGGGATCCAATGGGCTCCCTTGACGGCTGGGACCCTTCAACGCCGTCAGCGCCGTGCGACTGGCGTGGCGTCCTCTGTTACAATCACCGAGTCTTCGACCTACGCTTACCACGTCTCGAACTCGGTGGCCAACTCACTAACTCGCTCTCCAAACTCACTCAGCTCAGGAGGCTCAGCCTCCACTCCAACAACCTCAACGGTCCTATCCCTCACTCCCTCTCCGACTGTCTCCTCCTCCGCGCAGTCTACCTCCACAACAACTCCCTCTCCGGCCACCTCCCTCCGCCGCTCCTCAACCTCACCAACCTCCAGGTACTTAACCTCGCCCACAACCTCCTCTCCGGAACGCTCATCGGCGACATAACGGACTCGCTCCGGTACCTCGACTTGTCATCCAACACATTCTCCGGCGACATTCCGGCGAACTTCTCCTCCAAATCTCAGCTCCAGCTAATCAACTTGTCCTACAATGGCTTCTCCGGCGGGATTCCGGTCACCATCGGAGCTCTAAAGAAGCTGGAGTATCTCTGGCTTGACTCCAACAACTTGCATGGGACCTTACCTTCAGCTCTCGCAAACTGCACCAACCTCGTCCACGTCAGCGCCGAGAAGAATGCCATCGGAGGGTTAATCCCTTCAACAATGGGGACGATGCCGAAGCTTCAGGTTCTGTCCCTTTCAACGAATAACCTTTCAGGTTCGGTCCCCACTTCGTTGTTGTGCGGTTCTTCGTCCCTTCGAATCGTTAAGCTTGGCTTTAATTTTCTCACGGGAGTTTCCGAGCCGCAAAGTACAAAGAACTGCGTCATCAACAGCGTCTTGGAAGTTTTTGACATTCAACAGAATCACGTTGTTCACGCTGAGTTTCCTTCTTGGTTAACTAGTGCCACGTCACTGAAAGTTCTAGATCTCTCTGGAAACTCGTTTTCCGGCACTCTACCTTCGGATATCGGAAACCTCTTCATGCTGGAGGAACTAAGAGTGGCGAATAATTCTTTACACGGAGAAGTTCCGAGCGGCATTGTGAATTGTAGGTTTTTAAGGGTTCTTGATCTTCAGGGGAACCGATTCTCTGGCTCTATTCCTTCCTTTCTTGCCGAACTTGGTAACTTGAAGATGCTATCACTCGCTGGAAACGTGTTCACCGGTTTTATTCCCGCCAGTTATGGGACACTCTCTGCGCTTGAGACTTTGAATTTAAGCAATAATAATCTGACTGGCACTGTGCCCCCTGAGATAATGCATTTAGGGAATGTGAGTGCTCTGAATCTCAGCAACAACAGATTCTCCAGCCAAGTTTTACCTGATATCATTGGGGACTTGAAAGCTTTGGAGATTCTTAATTTAAGTCGATGTGGATTCTATGGAAAGGTTCCTGCTACGCTAGGAAGCTTGATGAAGCTAACTGTGTTGGATTTGAGCAAGCAGAACCTTTCAGGTGAATTGCCAATTGAACTTTTTGGTCTGCCAAGTTTGCAAGTTGTTGCGTTTCAAGAGAATCAATTGAGTGGTTCTGTTCCCGAGGGTTTCAGCAGCATTGTTAGTCTTCAGTATCTTAATCTCACTCATAATGCATTCTTTGGGGAAATTCCACCAACCTATGGATTCCTGGATTCCTTGAGTGTTCTATCTTTGTCTCACAACAGCATTTCAGGTTCAATACCTCCTGAGATTGGTGATTGTTCTCAACTTCAAGTGTTGGAGCTGCATTTAAATCGTTTGGATGGTAACATTCCTGATGATATCTCGCTCCTTTCACATTTGAAGGAGCTTAATTTGGGACACAATAGATTGAAGGGTGATATACCAAATGAAATATCACAATGTTCTGCTCTGATTTCACTCTTGTTGGATGATAATCAATTCACAGGTCATATACCAGAATCCCTGGCCAAATTATCAAACTTGTCCTCATTGGATCTCTCCTCGAATCAATTGAATGGAGAAATTCCAGTTAGCCTCTCTCAAATTAATGGTTTGAAGAATCTAAATCTGTCCAACAATGAACTTGAGGGTGAGATTCCACAAATGCTTGGTTCAAGATTCAATGACCCTTCCGTGTTTGCAATGAACCAAAACTTATGCGGCAAGCCTCTGCATAGAGAATGCGCAAACGTAAGAAGGAGAAAGAGGAGAAGACTAATAATCTTCATAGGCGTGGCTGTGGCTGGACTAATCATTTTGGCACTGTGTTGTTGCGGCTATGTTTACAGCCTCTGGAGATGGAGAAACAAGCTCCGGCAAGGGGTAACCGGAGAGAAGAAAAGAAGCCCCACAAGCACAAGCACGGGAGGAGAAAGAGGCAGAGGAAGCGGTGAAAATGGAGGACCAAAGCTAGTAATGTTCAACAACAAAATCACATATGCGGAGACATTGGAAGCAACAAGAAACTTTGATGAGGAGAATGTGCTGAGCAGAGGGAGACACGGTCTTGTCTTCAAAGCCTCCTACCAAGACGGCATGGTTCTCTCCATTCGCCGCCTCACTGACGGATCCATCAACGAGGCCACGTTTCGCAAAGAAGCAGAGTCACTAGGAAAAGTAAAGCACCGAAATCTAACTGTTCTTCGTGGATACTACGCAGGAGCACCAGATGTGAGGCTCCTTGTGTATGATTACATGCCAAACGGGAACTTAGGAACATTGCTTCAAGAAGCTTCGCAACAAGACGGACATGTGCTGAATTGGCCAATGCGGCACCTCATTGCACTGGGCATTGCTCGAGGGCTAAGTTTCTTGCACTCGGTGCCAATTGTTCATGGTGATGTGAAGCCTCAAAATGTTCTCTTTGATGCAGATTTCGAGGCCCATTTGTCCGAATTCGGGTTAGAGAGATTAACCATAGCAGGAGCAGCAGCAGCAGAAGCTTCATCGTCTTCAACCCCAGTTGGTAGCTTAGGTTATGTGTCACCGGAAGCAGCATTAACGGGGCAAGCAACGAAGGAAGCAGATGTATACAGCTTTGGGATCGTGTTGTTGGAGATTCTGACTGGGAAGAAACCAGTGATGTTTACGCAAGATGAGGACATAGTGAAGTGGGTGAAGAAGCAGTTACAAAGGGGTCAGATTTCGGAGTTGTTGGAACCTGGTTTGCTTGAGATTGATCCTGAATCTTCCGAGTGGGAAGAGTTCTTGTTGGGTATAAAGGTGGCTCTATTGTGCACATCACCTGACCCTCTTGATCGCCCTTCCATGCCTGACATTGTTTTCATGCTAGAAGGTTGTCGCGTCGGACCCGAAATACCTTCCTCCGCCGATCCTACAACGCTGCCTTCCCCTGCATGA 3432 0.4784 MALTTATFLIFTAVAYFTTITITLTCAQQTRSTVTIAEIEALTAFKMNLRDPMGSLDGWDPSTPSAPCDWRGVLCYNHRVFDLRLPRLELGGQLTNSLSKLTQLRRLSLHSNNLNGPIPHSLSDCLLLRAVYLHNNSLSGHLPPPLLNLTNLQVLNLAHNLLSGTLIGDITDSLRYLDLSSNTFSGDIPANFSSKSQLQLINLSYNGFSGGIPVTIGALKKLEYLWLDSNNLHGTLPSALANCTNLVHVSAEKNAIGGLIPSTMGTMPKLQVLSLSTNNLSGSVPTSLLCGSSSLRIVKLGFNFLTGVSEPQSTKNCVINSVLEVFDIQQNHVVHAEFPSWLTSATSLKVLDLSGNSFSGTLPSDIGNLFMLEELRVANNSLHGEVPSGIVNCRFLRVLDLQGNRFSGSIPSFLAELGNLKMLSLAGNVFTGFIPASYGTLSALETLNLSNNNLTGTVPPEIMHLGNVSALNLSNNRFSSQVLPDIIGDLKALEILNLSRCGFYGKVPATLGSLMKLTVLDLSKQNLSGELPIELFGLPSLQVVAFQENQLSGSVPEGFSSIVSLQYLNLTHNAFFGEIPPTYGFLDSLSVLSLSHNSISGSIPPEIGDCSQLQVLELHLNRLDGNIPDDISLLSHLKELNLGHNRLKGDIPNEISQCSALISLLLDDNQFTGHIPESLAKLSNLSSLDLSSNQLNGEIPVSLSQINGLKNLNLSNNELEGEIPQMLGSRFNDPSVFAMNQNLCGKPLHRECANVRRRKRRRLIIFIGVAVAGLIILALCCCGYVYSLWRWRNKLRQGVTGEKKRSPTSTSTGGERGRGSGENGGPKLVMFNNKITYAETLEATRNFDEENVLSRGRHGLVFKASYQDGMVLSIRRLTDGSINEATFRKEAESLGKVKHRNLTVLRGYYAGAPDVRLLVYDYMPNGNLGTLLQEASQQDGHVLNWPMRHLIALGIARGLSFLHSVPIVHGDVKPQNVLFDADFEAHLSEFGLERLTIAGAAAAEASSSSTPVGSLGYVSPEAALTGQATKEADVYSFGIVLLEILTGKKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLEIDPESSEWEEFLLGIKVALLCTSPDPLDRPSMPDIVFMLEGCRVGPEIPSSADPTTLPSPA 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02472 1143 Gene3D Transferase(Phosphotransferase) domain 1 923 1129 - -
Aip07g02472 1143 Pfam Protein tyrosine and serine/threonine kinase 850 1068 IPR001245 GO:0004672|GO:0006468
Aip07g02472 1143 Gene3D Ribonuclease Inhibitor 318 483 IPR032675 -
Aip07g02472 1143 ProSitePatterns Serine/Threonine protein kinases active-site signature. 967 979 IPR008271 GO:0004672|GO:0006468
Aip07g02472 1143 MobiDBLite consensus disorder prediction 802 817 - -
Aip07g02472 1143 SUPERFAMILY L domain-like 37 331 - -
Aip07g02472 1143 SMART serkin_6 847 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02472 1143 Gene3D Ribonuclease Inhibitor 173 240 IPR032675 -
Aip07g02472 1143 Gene3D Phosphorylase Kinase; domain 1 824 922 - -
Aip07g02472 1143 Gene3D Ribonuclease Inhibitor 36 172 IPR032675 -
Aip07g02472 1143 ProSiteProfiles Protein kinase domain profile. 847 1130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02472 1143 SUPERFAMILY Protein kinase-like (PK-like) 826 1132 IPR011009 -
Aip07g02472 1143 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Aip07g02472 1143 SUPERFAMILY RNI-like 471 743 - -
Aip07g02472 1143 PRINTS Leucine-rich repeat signature 444 457 - -
Aip07g02472 1143 PRINTS Leucine-rich repeat signature 682 695 - -
Aip07g02472 1143 SMART LRR_typ_2 634 658 IPR003591 -
Aip07g02472 1143 SMART LRR_typ_2 149 186 IPR003591 -
Aip07g02472 1143 SMART LRR_typ_2 101 125 IPR003591 -
Aip07g02472 1143 SMART LRR_typ_2 369 393 IPR003591 -
Aip07g02472 1143 SMART LRR_typ_2 441 464 IPR003591 -
Aip07g02472 1143 SMART LRR_typ_2 267 291 IPR003591 -
Aip07g02472 1143 SMART LRR_typ_2 538 561 IPR003591 -
Aip07g02472 1143 SMART LRR_typ_2 465 490 IPR003591 -
Aip07g02472 1143 SMART LRR_typ_2 586 610 IPR003591 -
Aip07g02472 1143 SMART LRR_typ_2 682 706 IPR003591 -
Aip07g02472 1143 SMART LRR_typ_2 219 243 IPR003591 -
Aip07g02472 1143 MobiDBLite consensus disorder prediction 799 826 - -
Aip07g02472 1143 Pfam Leucine Rich Repeat 636 658 IPR001611 GO:0005515
Aip07g02472 1143 Pfam Leucine Rich Repeat 347 369 IPR001611 GO:0005515
Aip07g02472 1143 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 13 1139 - -
Aip07g02472 1143 Gene3D Ribonuclease Inhibitor 484 761 IPR032675 -
Aip07g02472 1143 PANTHER LRR RECEPTOR-LIKE KINASE 13 1139 - -
Aip07g02472 1143 Pfam Leucine rich repeat 516 574 IPR001611 GO:0005515
Aip07g02472 1143 Pfam Leucine rich repeat 396 454 IPR001611 GO:0005515
Aip07g02472 1143 Pfam Leucine rich repeat 173 232 IPR001611 GO:0005515
Aip07g02472 1143 ProSiteProfiles Leucine-rich repeat profile. 636 658 IPR001611 GO:0005515
Aip07g02472 1143 SUPERFAMILY L domain-like 321 551 - -
Aip07g02472 1143 Gene3D Ribonuclease Inhibitor 241 317 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02472 Aip-Chr7 103568567 103572293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02472 1 1143 Receptor kinase-like Gene Family AT1G75640 63.771 0.0 1358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Aip07g02472 PK_Tyr_Ser-Thr 1.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02472 - - gmx:100784917 1648.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02472 07 103568567 103572293 Aip07g02472 07 103568567 103572293 ECH