Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02446 ATGAAGGAACAATCAGGCACGCCCCTTGCATCGTTGCCTCGGCCTCAACCTCAGGTGGAGTGGAATGAGCTTGGATATAGTTCATGGGACACTCAGACTTCTCAAAATCTTAAGAGGCCATTAGAAGCTACATTGTTGGAGAACACTTTCCTAACAAGTCCCTGCATGCCACATTATGATAATGGAACTGTTGAAATGAATATTCATTTGAAACCTCAACTTGGAAACAACACTAGATCCCGTTTATGGATTCCTCAGCAAGAAGAATCTGTTGCTAAGAGAGCTCTCTTACAACAGAAGAACGCAACGCTGCCTAAGGTTAACCGAAAAGGTCATCTTGCAGGTTCAGGTTCATGTTCAGTTAGCATAATACCACAGAATGATCAACATTTTCTAACTGAACTAGATCAACATTCTTTTGAAATTCATAATCCTTTATCTCCTGACATTTTTAAATTAGAACCTGAGGTGTTAAGTGATCCTGTTAATCCTCAAAGTCAAAATTGGAGTTCATCAGTGGTTGGTATTCCCCAATCTGATTCTGCCACTGTGAATGGCCTAATTCCTCTGCAAGATACAGATGAATGGATGGTGCATTCTTCTTGCCAACAAGGATTGCAAGAACATCGTATATTAAGATCTGAAGCAGTTTTGAGGAATCTCTCAGCTAAAAGCAACAATCCTGGTGAAATTTGGGGTAACACCAGTGTTGATGTTAGCAGTGCAAGTGCCACCATGGTTGAGCCTTCGAATTCAAGTGCCATTTTGGATGAATTTTGCACACTTCAGGACAAGGATTTTCAGAAACTATCAGATTGCATCGTGAGCAACTTCAGTATGAGCCAGGATGTCCAGTCACAGATAACATCAGCAAGTCTAGCTGAGTCCCATGTGTTTTCTGTGCAAGACCTCGCCATCGACGCAGGTGGTGCATCTTCAAGCCATGCTGATTTTAATGAATGCAGCTTTCTGCAAAATAATTCAAGGCCGCGAGTAGCTTCGAAAGCTCCACCCAGGCGTACCTATACTAAGGTACAAAGGGCTGGTTCTGTAGGAAGATCAATTGATGTCACTGCTTTCAAGAACTATGAGGAACTGATACATGCAATTGAATCCATGTTCGGACTCGAGGGTCTGCTTAATGACGACACCAGAGGCAGAGATTCAGAATGGAAGTTAGTATATGTTGATTATGAGAATGATGTTCTACTTGTTGGGGATGATCCTTGGGGGGAATTTGTGAACTGCGTCCGCTGCATCAGAATTTTGTCACCTACAGAGCTTAAGAAGATGAGCAAAGAGGGAATGCAGCTTCTAAATAGTGGTGCATTGCAACGGATCAATGGTCACTTGCACTAA 1359 0.4246 MKEQSGTPLASLPRPQPQVEWNELGYSSWDTQTSQNLKRPLEATLLENTFLTSPCMPHYDNGTVEMNIHLKPQLGNNTRSRLWIPQQEESVAKRALLQQKNATLPKVNRKGHLAGSGSCSVSIIPQNDQHFLTELDQHSFEIHNPLSPDIFKLEPEVLSDPVNPQSQNWSSSVVGIPQSDSATVNGLIPLQDTDEWMVHSSCQQGLQEHRILRSEAVLRNLSAKSNNPGEIWGNTSVDVSSASATMVEPSNSSAILDEFCTLQDKDFQKLSDCIVSNFSMSQDVQSQITSASLAESHVFSVQDLAIDAGGASSSHADFNECSFLQNNSRPRVASKAPPRRTYTKVQRAGSVGRSIDVTAFKNYEELIHAIESMFGLEGLLNDDTRGRDSEWKLVYVDYENDVLLVGDDPWGEFVNCVRCIRILSPTELKKMSKEGMQLLNSGALQRINGHLH 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02446 452 Gene3D - 337 432 - -
Aip07g02446 452 ProSiteProfiles PB1 domain profile. 340 427 IPR000270 GO:0005515
Aip07g02446 452 Pfam AUX/IAA family 335 429 IPR033389 -
Aip07g02446 452 PANTHER AUXIN RESPONSE FACTOR 5 168 446 - -
Aip07g02446 452 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 168 446 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aip07g02446 452 SUPERFAMILY CAD & PB1 domains 353 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02446 Aip-Chr7 102953587 102955407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02446 241 444 B3 DNA Binding Superfamily AT1G19850 60.000 3.64e-71 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Aip07g02446 AUX_IAA 2.8e-12 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02446 K14486 - adu:107460158 885.56