Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02367 ATGGGAGATACAGAGAGTCGCGGTAGCAGGGTGTGCAATTCTTGGTGGAATCAGAGTGGACGAAAGCAGAAGCAGAAGGATGAAGTTTACGGCGAGGTTCTTAGTAGACTTAAAGGATTGAATGTCAAAGAGGCTTCAGTTCCTGGTTTTGATGATGAGCTTTGGGCTCACTTCTACTACCTTCCAACTAGATATGCGTTGGATATGAACGTGGAGAGGGCACAAGATGTGCTTATGCACAAAAGGTTGCTTCACATGGCACGATTCCCTACTATTGCAACTGGACCTGCAATTGAAGTTCGTCTTGTTCAGGTTCGTGCTTCTTCTGCTGTACGCAGTCCTCAATATTTTGATACTTCAGCCACAATGATGAGCTTCCATCCACCCCCAGCCTTTGCTTCATCAGCTAATCTTGAACTTGATCTATGCAAAAGTCAGTTACAAGCTGAAGATAAGAGTAACAATTTCAATTTTTACGCACACTATGCCCGTAATTCATGCAGGCCAGTGCATGAAATCACAATTTCAACAAATGACAAGCCAAAACTCCTCAGTCAGTTAACTTCTTTAATCTCTGAGACTGGGCTTGACATTCAAGAAGCACATGCTTTTTCGACGTTGGATGGATACTCTCTGGATGTTTTTGTTGTTGGTGGTTGGGCAGTTGAGGAGACAGAGAAATTAAAACATGTACTAGCAAAGAAAATGCAAAAACTCGAGCAACCTCAGTTGAAAGAAAATGGCACTATTAATACAGCAGAGCAAGGGAATACTGGGTTCAAATTTATATCTAGTCATGTAAATTTTGCTAATAATGGAAATGATGTCTGGGATGAAAGATGTTTGAGATGTGAAAAGAAAATTGCATCTGGATCTTTCAGTGATCTGTATAAGGGTATTTTCTGTAACCAAGATGTGGCTATCAAAGTTCTCAAGGACGATAATTTGAATGAAAATATACAGAGGGAGTTTTATCAAGAAGTCTATATCCTAAGTAAAATTCAACATAAAAATGTCGTGAGATTTTTTGGTGCCTGTACAAAACCCCCTAACCATTACCTTGTCACAGAATATATGTCTGGTGGAAGTATGTATGACTTTCTTCATATAAAGAAGGCTGCGCTTTCTCTCCCATGGTTGCTTAAGGTTGCCATTGAGGTTTCAGAAGGAATGAAATATTTGCACCAGAATGATATCATACATCGAGACCTCAAAACAGCTAATCTCTTGATGGATAATAAAGGGGTAGTTAAGGTTGCTGATTTTGGGGTGGCTAGAGTGAACAATCAATCCGGGGTGATGACTGCAGAAACTGGAACTTATCGGTGGATGGCTCCGGAGGTGATTGAGCATAAACCATATGATCACAAAGCTGATGTTTATAGTTTCGGCATTGTCCTTTGGGAGCTTCTCACAGGAAAGCTTCCTTATGAGCATTTGTCCCCATTGCATGCGGCAGTTGGAGTGGCCCAAAAGGGTTTGAGGCCGGAAATTCCAAGGCACACGCATCCAATGTTGGTGGAATTAATTCACCGGTGCTGGCACCAAGATCCATCTTCAAGACCGAATTTCACAGAAATTCTGGAATTTCTGTTGCACATAACCATGAAGGTTGCTGGGAAAGGTCGTTCGTTCATCATGCTTTGGAACCCTTTGACCTCTAACTGCAGATGTGAATAA 1680 0.4149 MGDTESRGSRVCNSWWNQSGRKQKQKDEVYGEVLSRLKGLNVKEASVPGFDDELWAHFYYLPTRYALDMNVERAQDVLMHKRLLHMARFPTIATGPAIEVRLVQVRASSAVRSPQYFDTSATMMSFHPPPAFASSANLELDLCKSQLQAEDKSNNFNFYAHYARNSCRPVHEITISTNDKPKLLSQLTSLISETGLDIQEAHAFSTLDGYSLDVFVVGGWAVEETEKLKHVLAKKMQKLEQPQLKENGTINTAEQGNTGFKFISSHVNFANNGNDVWDERCLRCEKKIASGSFSDLYKGIFCNQDVAIKVLKDDNLNENIQREFYQEVYILSKIQHKNVVRFFGACTKPPNHYLVTEYMSGGSMYDFLHIKKAALSLPWLLKVAIEVSEGMKYLHQNDIIHRDLKTANLLMDNKGVVKVADFGVARVNNQSGVMTAETGTYRWMAPEVIEHKPYDHKADVYSFGIVLWELLTGKLPYEHLSPLHAAVGVAQKGLRPEIPRHTHPMLVELIHRCWHQDPSSRPNFTEILEFLLHITMKVAGKGRSFIMLWNPLTSNCRCE 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02367 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 399 411 IPR008271 GO:0004672|GO:0006468
Aip07g02367 559 SUPERFAMILY Protein kinase-like (PK-like) 280 531 IPR011009 -
Aip07g02367 559 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 535 - -
Aip07g02367 559 SUPERFAMILY ACT-like 168 240 IPR045865 -
Aip07g02367 559 ProSiteProfiles ACT domain profile. 172 251 IPR002912 -
Aip07g02367 559 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 9 535 - -
Aip07g02367 559 CDD STKc_MAP3K-like 288 531 - -
Aip07g02367 559 Pfam Protein tyrosine and serine/threonine kinase 283 531 IPR001245 GO:0004672|GO:0006468
Aip07g02367 559 Gene3D Phosphorylase Kinase; domain 1 278 360 - -
Aip07g02367 559 Gene3D Transferase(Phosphotransferase) domain 1 361 545 - -
Aip07g02367 559 PRINTS Tyrosine kinase catalytic domain signature 393 411 IPR001245 GO:0004672|GO:0006468
Aip07g02367 559 PRINTS Tyrosine kinase catalytic domain signature 356 369 IPR001245 GO:0004672|GO:0006468
Aip07g02367 559 PRINTS Tyrosine kinase catalytic domain signature 439 449 IPR001245 GO:0004672|GO:0006468
Aip07g02367 559 PRINTS Tyrosine kinase catalytic domain signature 502 524 IPR001245 GO:0004672|GO:0006468
Aip07g02367 559 PRINTS Tyrosine kinase catalytic domain signature 458 480 IPR001245 GO:0004672|GO:0006468
Aip07g02367 559 SMART serkin_6 282 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02367 559 ProSiteProfiles Protein kinase domain profile. 282 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02367 Aip-Chr7 98693289 98697110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02367 5 543 MAP Kinase Kinase Kinase AT4G35780 54.430 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aip07g02367 PK_Tyr_Ser-Thr 5.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02367 - - aprc:113864606 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02367 07 98693289 98697110 Aip07g02367 07 98693289 98697110 ECH