Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02313 ATGGGAAATTGTTTCCGGAAGCCGAGTAATAACAAGATTAATGAGCATCATGCTACTAATTCCAATCATAATAATAATAAACCACCTGCAGAAAGTAGGAAGGAGAAGGGAGTGATGAATAATAAGGTGACGCCGAATCTGAGAATATTTACATTGGATGAGCTGAAAACTGCGACAAGGAATTTCAGACCGGACACTATGTTAGGTGAGGGTGGTTTTGGTCGCGTCTTTAAAGGATGGATTGACCAAAATACCCTCAAGCCTTCCAAAGTCGGAGTTGGAATTCCGGTTGCCGTTAAGAAGTCTAACCCCGACAGCCTCCAAGGCCTCCAAGAATGGCAGAGTGAGGTGAAATTCTTGGGGAAGTTTTCTCATCCAAACCTGGTTAAACTAGTTGGCTATTGTTGGGAGGAGAATCAATTCTTGCTAGTATACGAATACATGCAAAAGGGCAGTTTGGAAAACCACCTCTTCAGAAGCCCAGAACCGCTTTCATGGGATATAAGGGTGAAGATAGCCATTGGAGCTGCGAGAGGCTTGGATTTCTTACATACGTCAGAGAAATCTGTAATCTATAGAGACTTCAAGTCCTCTAATATTCTTCTTGATGGGGATTACAACGCAAAGCTGTCGGACTTTGGATTGGCAAAGCTTGGCCCAGTTAACGGCAGATCCCATGTAACCACACGTGTCATGGGAACCTACGGTTATGCCGCCCCTGAGTATATGGCAACAGGTCATTTGTACGTGAAAAGTGATGTATATGGATTTGGCGTAGTCCTACTAGAAATGTTAACAGGCCTAATTGCTTTGGACACAAATAGGCCGTCAGGTCAACAGAATTTAGTAGAGTGGGTTAAGCCCTCCCTTTACGAGAAAAGGAAATTAAAGAAGAGAATGGATCCAAATTTGAGTGAACAATATCCCAAAAAAGCTGCTTTTGAGATAGCACAGCTTATATTACAATGCTTGGAAGAAGATCCAAAGAACCGACCATCCATGGAACAAGTCTTACAAACATTAGAGAAGTATTGTAATGTAGAGTATACTGCTCTCTCGTATGTATAA 1068 0.4223 MGNCFRKPSNNKINEHHATNSNHNNNKPPAESRKEKGVMNNKVTPNLRIFTLDELKTATRNFRPDTMLGEGGFGRVFKGWIDQNTLKPSKVGVGIPVAVKKSNPDSLQGLQEWQSEVKFLGKFSHPNLVKLVGYCWEENQFLLVYEYMQKGSLENHLFRSPEPLSWDIRVKIAIGAARGLDFLHTSEKSVIYRDFKSSNILLDGDYNAKLSDFGLAKLGPVNGRSHVTTRVMGTYGYAAPEYMATGHLYVKSDVYGFGVVLLEMLTGLIALDTNRPSGQQNLVEWVKPSLYEKRKLKKRMDPNLSEQYPKKAAFEIAQLILQCLEEDPKNRPSMEQVLQTLEKYCNVEYTALSYV 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02313 355 PANTHER SERINE/THREONINE-PROTEIN KINASE CX32, CHLOROPLASTIC-RELATED 15 347 - -
Aip07g02313 355 Gene3D Transferase(Phosphotransferase) domain 1 148 352 - -
Aip07g02313 355 MobiDBLite consensus disorder prediction 1 27 - -
Aip07g02313 355 MobiDBLite consensus disorder prediction 1 40 - -
Aip07g02313 355 Gene3D Phosphorylase Kinase; domain 1 46 147 - -
Aip07g02313 355 ProSiteProfiles Protein kinase domain profile. 62 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02313 355 PANTHER OS01G0588500 PROTEIN-RELATED 15 347 - -
Aip07g02313 355 Pfam Protein tyrosine and serine/threonine kinase 66 341 IPR001245 GO:0004672|GO:0006468
Aip07g02313 355 CDD STKc_IRAK 68 343 - -
Aip07g02313 355 ProSitePatterns Protein kinases ATP-binding region signature. 68 101 IPR017441 GO:0005524
Aip07g02313 355 SUPERFAMILY Protein kinase-like (PK-like) 40 342 IPR011009 -
Aip07g02313 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02313 Aip-Chr7 96152181 96155514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02313 10 341 Glycoside Hydrolase AT3G07070 47.321 4.91e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip07g02313 PK_Tyr_Ser-Thr 3.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02313 - - aprc:113865973 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02313 07 96152181 96155514 Aip07g02313 07 96152181 96155514 ECH