Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02301 ATGGCTTCGCTTTCTCTCAACATGGTTTCAGTTCCACCAAGAACAACAACAATCTCATGCACAAGAACAAGGGTGCCTTCACTTCCTTTCTCATTCACCACTTCATGGTTTCAGGCACCGGATAAGGCGCCATTGAAAGATGGTTCAAGCATCAATCAGCTTCTTGGTATTAAAGGAGCTGCTCAAGATTCAAATAAATGGAAGATTCAAGTTCAATTTACAAAATCTGTCACTTGGCCTCCGTTGGTTTGGGGTGTAGTTTGTGGTGCCGCTGCTTCTGGAAATTTCCATTGGACTATTGAGGATGTTGCTAAATCAATTGCGGGCATGTTGATGTCTGGCCCGTTTTTAACAGGATATACTCAGACTATAAATGATTGGTATGACCGAGAAATCCGAATTCCTTCTGGGGTTATATCTGAGAACGAGGTTATCACTCAAACATGGGTGCTGCTACTAGGAGGTCTTGGCTTGGCAGGTCTATTAGACGTATGGGTTGTAAAGTGGCGATGTCCAAAGCAAAGCCTATCTCCCAACCCCGATCCCGGATTTGGTTGTCCAAAGAAAAGCCTAGCTCCCAATGCTGATGCCGGTTTTGGATTTCCAAAGAAAACCATACCTCCCAAGAAAAGCCTTCCTCCTAACCCTGATACTAGTTTCCAGAAAATGGTCCTTTATTTAGAGTCTATAGGTCTAGACTCTTTCTCAGTTATCGAAAATCATCCGAAGTTGATCACTGCCTCCCTCGATGACATTAAATCTACAGTGGAATACATTATGTCCATGGACTTCACCACGACCGAGTTTCGACGCATAGTTGGCATGTGCCCGGATGTTTTGACCACCCACGTCTCGGACATCATACCCGTCTTTACCTTCCTTCTCCGCGAGGCTCATGTAAAAGGCTCGGATATTAAAAGGGTCATACATCGCCGCCCGAGGTTGCTCGTTTGCAGTGTCAATAACCAACTCCGTCCTACACTTTACTACCTCCAAAGTATTGGCATAGAAGAGGTAAGTAGGCACACTGATTTGCTATCATGTAGTGTCCAAGAAAAGCTTATACCCCGAATAGATTACTTCGAGAATATCGGGTTTTCTCGACGCGATGCAACTACCATGTTTCGAAGATTTCCTCCACTGTTTTGCTACAGTATTAAGAATAATCTGGAGCCGAAATACAATTACTTTGTGGTGGAGATGGGGAGAGATTTGAAGGAGCTGAAGGAGTTTCCACAGTATTTCTCATTTAGCTTAGAGAATAGAATTAAGCCGAGGCATAAACGCTGCATAGAAATGGGGGTGTGTTTCCCTCTCCCTGTGTTGTTAAAGATGACCGAAATGAGCTTTCAAAATAGGTTAGATCTATGTGTAAATTCCTCAACACCCTTGAAAAAATCTCCTCTCTGGTGTAATGCTTGTGATATTCAAGTATAG 1437 0.4349 MASLSLNMVSVPPRTTTISCTRTRVPSLPFSFTTSWFQAPDKAPLKDGSSINQLLGIKGAAQDSNKWKIQVQFTKSVTWPPLVWGVVCGAAASGNFHWTIEDVAKSIAGMLMSGPFLTGYTQTINDWYDREIRIPSGVISENEVITQTWVLLLGGLGLAGLLDVWVVKWRCPKQSLSPNPDPGFGCPKKSLAPNADAGFGFPKKTIPPKKSLPPNPDTSFQKMVLYLESIGLDSFSVIENHPKLITASLDDIKSTVEYIMSMDFTTTEFRRIVGMCPDVLTTHVSDIIPVFTFLLREAHVKGSDIKRVIHRRPRLLVCSVNNQLRPTLYYLQSIGIEEVSRHTDLLSCSVQEKLIPRIDYFENIGFSRRDATTMFRRFPPLFCYSIKNNLEPKYNYFVVEMGRDLKELKEFPQYFSFSLENRIKPRHKRCIEMGVCFPLPVLLKMTEMSFQNRLDLCVNSSTPLKKSPLWCNACDIQV 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02301 478 Gene3D Transcription termination factor 3, mitochondrial 285 457 IPR038538 -
Aip07g02301 478 SMART mt_12 405 436 IPR003690 GO:0003690|GO:0006355
Aip07g02301 478 SMART mt_12 306 337 IPR003690 GO:0003690|GO:0006355
Aip07g02301 478 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Aip07g02301 478 SMART mt_12 235 265 IPR003690 GO:0003690|GO:0006355
Aip07g02301 478 SMART mt_12 372 404 IPR003690 GO:0003690|GO:0006355
Aip07g02301 478 SMART mt_12 338 367 IPR003690 GO:0003690|GO:0006355
Aip07g02301 478 Gene3D UbiA prenyltransferase 71 171 IPR044878 -
Aip07g02301 478 PANTHER CGI-12 PROTEIN-RELATED 220 464 IPR003690 GO:0003690|GO:0006355
Aip07g02301 478 Pfam mTERF 221 298 IPR003690 GO:0003690|GO:0006355
Aip07g02301 478 Pfam mTERF 342 451 IPR003690 GO:0003690|GO:0006355
Aip07g02301 478 PANTHER OS03G0360600 PROTEIN 220 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02301 Aip-Chr7 95940128 95943522 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aip07g02301 mTERF 5.4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02301 K15032 - ahf:112704905 896.345