Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip07g02272 | ATGACTCGTCCCTTGAGAATTTTAGGCGAGCGCAACTCGTCAACCACCGACAACGCCCCCTCCGTCGTCGACTCCGACTTCGTCGTCATCCTCGCCGCCCTCATCTGTGCTCTCATCTGCGTTCTCGGACTGGTCGCTGTAGCTCGCTGCGCTTGTCTCCGCCGCCTCCGCCTCTCATCCTCCTCCGCCGCCGCTACTCCCTCGCTTCCCGCAGCTGCCAACAAAGGTGTCAAGAAGAAGGTACTCAGCTCTCTCCCCAAGGTCACCGCCACAGTCGAGTCGGCTGGCAAGTTCTCCGACTGCGCGATCTGCCTGGCGGAGTTCACAGCCGGGGATGAGATCCGAGTGCTGCCTCAGTGTGGCCACGGCTTCCACGTGTCGTGTATCGACGCGTGGCTGAGGTCGCATTCATCGTGTCCATCGTGCCGTCAGATTCTGGTGGTTCCGAGATGCAACAAGTGCGGTGGTTTTCCAGCACCCGCGAGCTCGAGCACCACCGCCACCGCCTCTCAGCCACCGGAATCGGATTCCACATTTAAAGTAAGCGGCGATCATGCCAATAGGGCGGTGTTCGCAGCTAGGAGGTCGACATTGGTCGGATTGGTAGAAGGCGTCACTGAGTGGTTCGTCATGGCTTGGTCCCTGAAGAAAAAGTGGAAAGCAGGGTGTTACGTTGTTAGCCTCAGCAACTTAAAGAGCGAGGTGGGGTCGGGCCTCACGGTGGGTATATACTGTTCGTGCAAGGATGCGCGGCTCCGTGCTATACGTCGGCTTCCGTCGGTCAGAGACTTTTGTCCTGCAGCGGAGAAACGCCAAGCCTGA | 822 | 0.5925 | MTRPLRILGERNSSTTDNAPSVVDSDFVVILAALICALICVLGLVAVARCACLRRLRLSSSSAAATPSLPAAANKGVKKKVLSSLPKVTATVESAGKFSDCAICLAEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVPRCNKCGGFPAPASSSTTATASQPPESDSTFKVSGDHANRAVFAARRSTLVGLVEGVTEWFVMAWSLKKKWKAGCYVVSLSNLKSEVGSGLTVGIYCSCKDARLRAIRRLPSVRDFCPAAEKRQA | 273 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip07g02272 | 273 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 67 | 147 | IPR013083 | - | |
Aip07g02272 | 273 | PANTHER | RING-H2 FINGER PROTEIN ATL8 | 1 | 174 | - | - | |
Aip07g02272 | 273 | Pfam | Ring finger domain | 100 | 143 | IPR001841 | - | |
Aip07g02272 | 273 | SMART | ring_2 | 101 | 142 | IPR001841 | - | |
Aip07g02272 | 273 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 1 | 174 | - | - | |
Aip07g02272 | 273 | CDD | RING-H2_PA-TM-RING | 100 | 143 | - | - | |
Aip07g02272 | 273 | MobiDBLite | consensus disorder prediction | 162 | 181 | - | - | |
Aip07g02272 | 273 | SUPERFAMILY | RING/U-box | 94 | 149 | - | - | |
Aip07g02272 | 273 | ProSiteProfiles | Zinc finger RING-type profile. | 101 | 143 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip07g02272 | Aip-Chr7 | 95341224 | 95344338 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip07g02272 | 5 | 154 | C3H Transcription Factor Family | AT1G20823 | 66.038 | 1.26e-63 | 196 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip07g02272 | - | - | gmx:100794614 | 208.764 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip07g02272 | 07 | 95341224 | 95344338 | Aip07g02272 | 07 | 95341224 | 95344338 | ECH |