Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02272 ATGACTCGTCCCTTGAGAATTTTAGGCGAGCGCAACTCGTCAACCACCGACAACGCCCCCTCCGTCGTCGACTCCGACTTCGTCGTCATCCTCGCCGCCCTCATCTGTGCTCTCATCTGCGTTCTCGGACTGGTCGCTGTAGCTCGCTGCGCTTGTCTCCGCCGCCTCCGCCTCTCATCCTCCTCCGCCGCCGCTACTCCCTCGCTTCCCGCAGCTGCCAACAAAGGTGTCAAGAAGAAGGTACTCAGCTCTCTCCCCAAGGTCACCGCCACAGTCGAGTCGGCTGGCAAGTTCTCCGACTGCGCGATCTGCCTGGCGGAGTTCACAGCCGGGGATGAGATCCGAGTGCTGCCTCAGTGTGGCCACGGCTTCCACGTGTCGTGTATCGACGCGTGGCTGAGGTCGCATTCATCGTGTCCATCGTGCCGTCAGATTCTGGTGGTTCCGAGATGCAACAAGTGCGGTGGTTTTCCAGCACCCGCGAGCTCGAGCACCACCGCCACCGCCTCTCAGCCACCGGAATCGGATTCCACATTTAAAGTAAGCGGCGATCATGCCAATAGGGCGGTGTTCGCAGCTAGGAGGTCGACATTGGTCGGATTGGTAGAAGGCGTCACTGAGTGGTTCGTCATGGCTTGGTCCCTGAAGAAAAAGTGGAAAGCAGGGTGTTACGTTGTTAGCCTCAGCAACTTAAAGAGCGAGGTGGGGTCGGGCCTCACGGTGGGTATATACTGTTCGTGCAAGGATGCGCGGCTCCGTGCTATACGTCGGCTTCCGTCGGTCAGAGACTTTTGTCCTGCAGCGGAGAAACGCCAAGCCTGA 822 0.5925 MTRPLRILGERNSSTTDNAPSVVDSDFVVILAALICALICVLGLVAVARCACLRRLRLSSSSAAATPSLPAAANKGVKKKVLSSLPKVTATVESAGKFSDCAICLAEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVPRCNKCGGFPAPASSSTTATASQPPESDSTFKVSGDHANRAVFAARRSTLVGLVEGVTEWFVMAWSLKKKWKAGCYVVSLSNLKSEVGSGLTVGIYCSCKDARLRAIRRLPSVRDFCPAAEKRQA 273
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02272 273 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 147 IPR013083 -
Aip07g02272 273 PANTHER RING-H2 FINGER PROTEIN ATL8 1 174 - -
Aip07g02272 273 Pfam Ring finger domain 100 143 IPR001841 -
Aip07g02272 273 SMART ring_2 101 142 IPR001841 -
Aip07g02272 273 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 174 - -
Aip07g02272 273 CDD RING-H2_PA-TM-RING 100 143 - -
Aip07g02272 273 MobiDBLite consensus disorder prediction 162 181 - -
Aip07g02272 273 SUPERFAMILY RING/U-box 94 149 - -
Aip07g02272 273 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip07g02272 Aip-Chr7 95341224 95344338 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02272 5 154 C3H Transcription Factor Family AT1G20823 66.038 1.26e-63 196
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02272 - - gmx:100794614 208.764
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02272 07 95341224 95344338 Aip07g02272 07 95341224 95344338 ECH