Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02266 ATGCTATCAATGGAAGAGCTAGCGTGTGAGCTGAGTGATCATGAAAAGAGAAACGCTCAAGGTTTGCCACCGGGTTTCAGGTTTCACCCAACTGATCAAGAACTCATTACCTTCTATTTGGCTTCCAAGGTCTTCAATAATACAAATGCTACTACTGCTACTACTACTACTACTCATGTCAACTTTGTGGAGGTTGATCTCAATCGATGCGAGCCATGGGAACTTCCAGAAGTGGCAAAGATGGGGGAGAGAGAGTGGTATCTGTACAGTGTGAGAGACAGAAAATACCCAACGGGCCTCAGAACTAACAGAGCAACCGCTGCTGGGTACTGGAAGGCTACCGGCAAGGACAAGCAAGTCTACGGCGGCGGTGGCCTTGTTGGGATGAAGAAGACGTTGGTGTTCTACAAAGGGAGGGCCCCCCGCGGTCAGAAGACTAAATGGGTAATGCATGAGTTCCGGTTGGACCCTCACAGCTCTCCTTCCCTCTCTAAGGATGAGTGGGTAATATGCAGAATATTTCATAAAAGTGGGGAAAAGAGAGCTCCTACTACTACTCCTCCTCCTCTGCTACTTCATCATCAACTGCAGCATCAGCAACAACACGATCCATTATTATTATTCCAAACCCCATCATCCCTGTTCAATGACCATATCTCCCACTCTCATAATCATAATCAAAACCTCCTCTCGCCATTGCTTCATCCTTTCCCAATCCCTGAAGAAACCACTAAAACCAGATCATCAACAATTAACAGCAACCATTACCCTCCACCACCACCTTCCTCCCAACACTCGCTTAAGCTCAACAAGTCTACTAAATTAACAAAAACAGTGCCTCCTTCTCCATCATTCTTCCAATACCAACAGCTTCTAGAAGATTATCCCAACTTATTGCATTGGATCGACAGTGGTAATAACAATAATAATAACTGCAACGCTAATAATACTGCTAGTAGTGTTGAGATAATGGATGCTGCTGCTGCTGGCTTGATAGCATTCTCATCAGGAGGACCTTCACCTACTCCTAATAATAATAATAATAATAATAATAACAATGCTGAAATAATGATGATGTCTTCTTCTTCGGCTTCTATGCTGCACATACTCGACGATGCTCCTCTTGGGATTCAATCTTGGCCTCATCATCATCATCATCACCTTCTGTAA 1170 0.441 MLSMEELACELSDHEKRNAQGLPPGFRFHPTDQELITFYLASKVFNNTNATTATTTTTHVNFVEVDLNRCEPWELPEVAKMGEREWYLYSVRDRKYPTGLRTNRATAAGYWKATGKDKQVYGGGGLVGMKKTLVFYKGRAPRGQKTKWVMHEFRLDPHSSPSLSKDEWVICRIFHKSGEKRAPTTTPPPLLLHHQLQHQQQHDPLLLFQTPSSLFNDHISHSHNHNQNLLSPLLHPFPIPEETTKTRSSTINSNHYPPPPPSSQHSLKLNKSTKLTKTVPPSPSFFQYQQLLEDYPNLLHWIDSGNNNNNNCNANNTASSVEIMDAAAAGLIAFSSGGPSPTPNNNNNNNNNNAEIMMMSSSSASMLHILDDAPLGIQSWPHHHHHHLL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02266 389 Pfam No apical meristem (NAM) protein 23 155 IPR003441 GO:0003677|GO:0006355
Aip07g02266 389 Gene3D NAC domain 31 180 IPR036093 GO:0003677|GO:0006355
Aip07g02266 389 MobiDBLite consensus disorder prediction 225 268 - -
Aip07g02266 389 ProSiteProfiles NAC domain profile. 22 176 IPR003441 GO:0003677|GO:0006355
Aip07g02266 389 PANTHER PROTEIN CUP-SHAPED COTYLEDON 3 12 291 - -
Aip07g02266 389 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 291 - -
Aip07g02266 389 SUPERFAMILY NAC domain 17 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02266 Aip-Chr7 95065518 95067059 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02266 1 198 NAC Transcription Factor Family AT1G76420 64.179 5.39e-88 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip07g02266 NAM 3.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02266 - - aip:107607453 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02266 07 95065518 95067059 Aip07g02266 07 95065518 95067059 ECH