Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02261 ATGTCGGGATCGGAGATGGGAAGCAGAGAAGGCTTCACCGTTGGGCTTCACAGCCATAACAACATGCGTTTGGACTTTTCTGATGGCCCTGCTCTCTACAGCAACAGCAACAACAACCCTCTTGCGCCACCTTCTGCTTCTCCAACTTACCACCCTTCCACCGCAGTCACCGCTGCTCCTATCAACATCAATGGCAGCGCGGTTGGCGGCATCGAATCGGTGGCGGCGCTGCCACAGGGCGGCCACATCGGGAGTAGCTCTGAGCCGAAGAAGAAGAGAGGGAGGCCAAGGAAATACGTACCGGATGGTGGCGGCGTAGGGTTAGGGTTGAATCCAGATTCTTCTGCTCCTGGTATGACCGTTAACCACAGCCAGAACCAGAATCCGAATCTGAATTCGAGCTTGAACCAGAATCAGTCCGGTGGCGGAGCTATGTCGCCGGGAATTGCTTCCGCCACACCTAATTCTAATTCCGGGAAGAAAAGGGGAAGGCCTCGTGGCTCTCTCAACAAGCATCCTCACTTAAAGGGTCTTGGATTGGCAAAACTTACTTTCACTCCGCATGTTCTTACTGTGAAATCTGGAGAGGATCTGGGAGTAAAGGTTACGTCCATCTCCATGGATGGTCCAAGAAATATTTGTATCTTAACAGCAAATGGAACCATATCTAATGTAACACTTAGCCAACCTTCGATACCTGGAGGAACTGTGACTTATGAGGGACGATTTGAGATCCTGGCACTCTGTGGTTCTTTTCTTCTTTCTGAAAATGGTCAGTTCCAAAGAACTGGTTCTTTAAGTCTGACCTTGTCTGGGCCTGATGGTCGGGTTATGGGTGGTGCAATCGCAGGTGTTTGTGTAGCTGCTTCCCCAATTCAGATAGTTTTCGCAAGCTTCCTTGTAGATGGTGGTTACAAGAAAATGAAGTCATCGAACCAGAATCAGAACCAGAACCAGAACCAGATGGGGACCTTAGCTTCCTCCCCTAATGTTCTCCCGGCAGGTCAAAGCAGCTCGCCATCGCATGGCACTCTTAGTGAATCTTCTGGTGGAGCCGGGAGCCCACTTAACCTGAGTACAGATGTTTGCAATAACAATAACACCCCACAAGGAATTTCTGGAATGCCCTGGAAATGA 1137 0.5004 MSGSEMGSREGFTVGLHSHNNMRLDFSDGPALYSNSNNNPLAPPSASPTYHPSTAVTAAPININGSAVGGIESVAALPQGGHIGSSSEPKKKRGRPRKYVPDGGGVGLGLNPDSSAPGMTVNHSQNQNPNLNSSLNQNQSGGGAMSPGIASATPNSNSGKKRGRPRGSLNKHPHLKGLGLAKLTFTPHVLTVKSGEDLGVKVTSISMDGPRNICILTANGTISNVTLSQPSIPGGTVTYEGRFEILALCGSFLLSENGQFQRTGSLSLTLSGPDGRVMGGAIAGVCVAASPIQIVFASFLVDGGYKKMKSSNQNQNQNQNQMGTLASSPNVLPAGQSSSPSHGTLSESSGGAGSPLNLSTDVCNNNNTPQGISGMPWK 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02261 378 MobiDBLite consensus disorder prediction 78 174 - -
Aip07g02261 378 SUPERFAMILY AF0104/ALDC/Ptd012-like 185 300 - -
Aip07g02261 378 MobiDBLite consensus disorder prediction 20 53 - -
Aip07g02261 378 MobiDBLite consensus disorder prediction 30 53 - -
Aip07g02261 378 Gene3D - 187 318 - -
Aip07g02261 378 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10-LIKE ISOFORM X1 21 377 - -
Aip07g02261 378 MobiDBLite consensus disorder prediction 115 163 - -
Aip07g02261 378 Pfam Plants and Prokaryotes Conserved (PCC) domain 187 299 IPR005175 -
Aip07g02261 378 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 21 377 IPR039605 GO:0003680
Aip07g02261 378 MobiDBLite consensus disorder prediction 308 378 - -
Aip07g02261 378 ProSiteProfiles PPC domain profile profile. 181 321 IPR005175 -
Aip07g02261 378 CDD DUF296 186 299 IPR005175 -
Aip07g02261 378 SMART AT_hook_2 90 102 IPR017956 GO:0003677
Aip07g02261 378 SMART AT_hook_2 159 171 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02261 Aip-Chr7 94916813 94920319 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02261 1 378 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 43.980 3.20e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02261 - - ahf:112705741 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02261 07 94916813 94920319 Aip07g02261 07 94916813 94920319 ECH