Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02246 ATGGCAGGGTTCAGCACCAACAATAACAATAACGAAGGAAGAGATCACTTCAATTTAGGGCGCTTTGTTCCACATCTTTTCAATCTCCACCTCCAAACCCCTAACAACAACAACAACAACAACAACAACAACAACCCCTTAACGCATCACCACCACCACCAACAACAATTCAACTCTCCTCCTCCTCCTGAACCTGCTGAAGCTGACGGTGATGCTGCTGGTGGTTCAAGAAGCGGAGGAGTATCCGCTGAACCCTCAACTGGGCGCCGTCCGAGGGGCCGTCCAGCAGGATCCAAGAACAAGCCCAAACCGCCTATCGTAGTCACGCGGGACAGCCCCAATGCACTGCGCTGTCACGTGCTTGAGGTCTCCGCCGGGGCGGAGCTCCTCGACGCACTCTCCACCTACGCTCGCCGGAGGGGGAGAGGCGTTTGCGTCCTCAGCGGCACTGGCACCCTCGCTAACGTTACGCTTCGCCAGCCTGGAGGCACAGTCGTAACCCTTCACGGAACCTTCGAGATCCTCTCCATCTCCGGGACGATTCTCCCGCCGCCTGCTCCACCTGGATCCGGAGGGATTTCGGTGTACCTGTCCGGCGGGCAAGGGCAGGTGGTCGGGGGGAACGTGGTGGCTCCTCTTGTGGCTTCAGCTGTTGTGGTTCTGATGGCTGCTTCGTTTGCAAATGCAATGTTTGAGAGATTGCCTTTGAATTTGGACGATGATGATCCTCGTGAGGACGATGACCACTTCAATCACCAACGACAACCTGCAGCATCGCAATCCTCTGGCGTAACTGGCCAGATCGCCGACGGCGCCAGCAGTGGTGGTCGCGCTGTTTCTTTCTTCAATTCGGCTGCAGGTATTGGTGGTGGAGGAAGGGGTTTGAACGGCAGAAGCGGCTATCCCTTGTCGCTTCCCAGCGGCGGCGATCTATTTGGATGGGGCGGTGGTGGTGGTGCAGGTGCAAGTGCAGCAGCGGCGATCAAGCCTCCACCGTTCTAG 1002 0.5739 MAGFSTNNNNNEGRDHFNLGRFVPHLFNLHLQTPNNNNNNNNNNNPLTHHHHHQQQFNSPPPPEPAEADGDAAGGSRSGGVSAEPSTGRRPRGRPAGSKNKPKPPIVVTRDSPNALRCHVLEVSAGAELLDALSTYARRRGRGVCVLSGTGTLANVTLRQPGGTVVTLHGTFEILSISGTILPPPAPPGSGGISVYLSGGQGQVVGGNVVAPLVASAVVVLMAASFANAMFERLPLNLDDDDPREDDDHFNHQRQPAASQSSGVTGQIADGASSGGRAVSFFNSAAGIGGGGRGLNGRSGYPLSLPSGGDLFGWGGGGGAGASAAAAIKPPPF 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02246 333 MobiDBLite consensus disorder prediction 30 110 - -
Aip07g02246 333 CDD DUF296 117 182 IPR005175 -
Aip07g02246 333 SUPERFAMILY AF0104/ALDC/Ptd012-like 114 236 - -
Aip07g02246 333 MobiDBLite consensus disorder prediction 30 57 - -
Aip07g02246 333 ProSiteProfiles PPC domain profile profile. 113 253 IPR005175 -
Aip07g02246 333 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 20 284 - -
Aip07g02246 333 MobiDBLite consensus disorder prediction 238 253 - -
Aip07g02246 333 MobiDBLite consensus disorder prediction 254 269 - -
Aip07g02246 333 Gene3D - 116 239 - -
Aip07g02246 333 MobiDBLite consensus disorder prediction 238 271 - -
Aip07g02246 333 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 20 284 IPR014476 GO:0003680
Aip07g02246 333 Pfam Plants and Prokaryotes Conserved (PCC) domain 117 227 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02246 Aip-Chr7 92542398 92544124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02246 86 237 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 71.779 2.36e-66 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02246 - - aip:107609871 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02246 07 92542398 92544124 Aip07g02246 07 92542398 92544124 ECH