Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02230 atgcgaggcatacctacagtggggAGTACCACTACCATCCTTTATCACCTGTCATGGACCAACACCACTCCCACTACGTCCACCACCACCACCACAGCCACCATNNNNNNNNNNNNNNNNNNNNNNNACACACCTCCTCCTCCGCCTCCTTATGCCCCCAATAACAACCATCCGCCATCCCATCAAAACCAATTCCCCCAATTCAATTCCCCTAACTACCCTAATCGCCCCTTCCAAGAAGAACACCCAATCTCCAACAACCACAATCAGCCATTTTCCCTATCCCCCAGGATTTCCAGCCGAATCCTCCCGGGCGATCCTTTCCCCCGCCGCAATTTTCCTCGTTTCGACACTGAAACACGCTGGAACCCTAACCCTGGCCGTAGGATCGCTCCCGACTGTCTCCTTCCGAGGAATTATACACCCGTTGATATCGACAGTGAATTGCGCCAACACCGTGAAGGGGTCTCGCTGCCGCCCTCGGCATATCCGGCCGAAAAGATTCGATACGATCCCGATCGCTCCAGGTTGAGACTTGAGTATGAGTATGAGGGTAACCCTAGGAAGGATGAGGAGTTTGGTTGCGGCAGCGGTAATGATGCTAATTACCACAATTACCACCGCCGCGGCGTTGGGGATTTGCCACCCAGACACGACTTGCCCAACGGAGGCTTCGGCAGGGCGCCACCGGCGATGCCAAGGGAGATTAATATTGATTTGAAACCCGGGGGGTATGTTCGCGGGTATAGTGCGGAATTCGAGGATGAGATTCCCAAGGTTGGAAGAAGAGATGGGCATGGCGAAGGCAAGAGGTGGTTGAATGAGAGGAGGGGACCTAAGGAGTTGCCTGATTCACGGTTCGAATTGGGGACCGGCGAGATTGGTTTTGCTAAGAATGTTGATGATTTCCGCGTTGGGACACGTGAGGAATATGGATGGGAATCGGGTAGGTATAGTGGCAGAGGGAACAGCAGGGAGTTTGGTCATGAATTATGGCGACCTTCTCTAAAGAAACAGGTTCAAAAGAAGAGTGCTCTTCTTAGGATCCAGAATGCAAAACCAAGTTATAGGAATCGTGAGATTGAACAATTACGGAATGCTGGTTATTCTGCTGAGTCTAACACTAATGTTTTCAGGGGCAAGGAGCAGTGTGGGCATGTAGGTTATGGGATGAAACAAGAAGAAAGGGAAGGAAGTCCTGTGGAGCTTGATATCTCTTTTGAATCAAATTCCCTGGTTGCGAAGGCTATTGTGACCACTTCGACTTCGACTGTTGTTAATGATACAAATATGAATTCTGTCTCTGATGCTGATTTAACTCCCTCAGAAAAGAGAAAAAAGGTTTCAGTATCCGATAGTGATTGTTCTGGTTTGGAAGCTGCAAAAGTATCTAGGGATGTTGTAACTTTGAATAGCTCATCCTGCAAAGTGAATGACTGCTCTGGATCTGTGAATGATTTAAGCTTACAGAATAATGTTGTTAATCCTTGTTCTCAACCTTGCACCCGCGAGACTGATAGTGTGAAAAATGAGGTTGCAGGTGGAAGTACCAAAATTCACTCTGGTAAATCCTCCCCAAGGGTTGTAAAGAAGAAAAAAGTTGTCAAGAGAGTAGTGAAGAAAGTTGTTGGAAATCCAAAATCTACAATGTCAAATTCACGATCAGCAAATAAGGTTCATGGATGTGTGCAACCTGATCGAGTCATACCTAGTTCTTCATCTGTCTCTGTTCCCAACAAAGTTGAACCTTGTCTTGAGCAGAAAAGCATCACTGTAGACAAGATGTCAATGCCTGGCCATAGTTCATACAATTTATCAAAGGATCGGAATCAATTGCTTGAAGATAGAAATGGAGATCTAACCCTGCTGAGTTTGGGGCCACATTCCAGGTCACGAGAATGTGAAACTGATGAAGATTCAGATACTCAGAAAGGAGCCGCCAGGTTTGAAAGTGGTCTTGACATTCCAAATTCTCAATCTTGTGCTTCTACTGGTCAAGCTAAAAAGATTGATTATGAGTGTTTAGATGCAAATAATTCTGTCCATGACTTGCGTAGAATGCCAGATACTAACATGGTTCCTGAATTATTAAATGGAAGTACTTCCAAAATCAATGATGTGGGTTGTGATATTAAACAGCTATGTCAGAATCAAGAGTTTCAATCACGTGAGAATTATTCAAATGTAAGATGTCCACAGAATGGGTTTGTTATAGATGTAGTAGATGACAGCGTTCTTAGTTCAGCTGACAATATTGGATCTAAAGAGAAGCTTACAGTTACTGAATGTGGTCTTACTGGTGAATCTGGTTTTGGACATATGGTCCCTACTATTATCACCAAGTATGCTATTTTGGAAGAAAATCCAGACGTGATCAACCCTGCATCAAGCAGCGCAATGTCTGCCCCTTCAAATTCAGGAAAAATTAGGATTCACGCTGGTACAGATTGCATACAAAATGCTATTGCTCTGACGCAGGGTTCTTATAGTGGACCGGTCAATTTAGATGATGGTACCTCTGTTCAGTGTTCTGACATCACTAATGATGCTGTGAAGGATGTTTCCCCCTGTTACGCTGCCATATCTTCTGAGAATTGTTGCACGGAAGAGCCATTTTCAAGTTCTAATCTTTCTGTTGGATTTGGTGAAGGGGATACAAACAATATGAAAAAGAGAAAAGCTAGGACTCATTCAAAGTTTTTGCACTCAAAGATGGAGGGAATTTCTCCAAAACCTGTAAATTCAGTTAGCCATGCAAATGATTGGGATACTGCCTCAAGTGTGAAGGTGAAGGATGCATGTTGTTCAGAAGTTTTGGATCAATCTGTTCAAAGCTTAGATTCTAACCTGGAATCGTGCTTGGATGGGATCGTTACTTTACATGGGAAAAAGGAGCTTTCAGAGGCTGAGCTTTGTGTTAGAGATAATGAGATTGATGATGCAAATTATCTTTCACTATTATCTAAAGGGATCAAAGTCACGACTACCTCTGAGTTGAGTGATGCAGTTGTGGTATCCAAATCTTGTGCGGATTTTCCTGTTTCTTTCAGTGATAAACAAGCGCCCGAAAAAGAAGTTGAATTGTCAAGCATGGATGTTCTGTTTAGTGCACAATCATTGTCATGTTCAGAGGATAGTAGGAAATTGTCTGACAATTTTGTTGGAGGTTCTTGTGACGCTAGATATGCAAATAATGAAACCATGAGTTCTGACCATTTTGAATTAAAGAACTCAGATTTTGCATCTCATTCACTTCGTGAGGACTTGGACATTCAGTTCCCATTGTTGGATGGTGAATGCAAAGAAAATGGCACTCAAATGCAAACTGACATTTTTACGTCTGGATTTAATAAGGGAGATATGAAGGACAGTTTAATTCATCAACAGAGCATTGTGTCCCATCCTTCCGATGGTGATTTGGAGGAGGATGCACCTGAAGCACCATCAGATGTGTGTTCTCAAGGGATATCGGAAGCACCTGAGAGAGGGAATTTAAATTGTACATCAATCCAAGATGAAAACAATTGTGGGGATATATCTGCAGTTGAACATGGTTCTGATTTGCCTACTTGTACTTCACCAATACAGCATACTAATAAGATTATGAAGTCAGCTAATGCAACTGGGCATAGTAACCCAGTTGAGAGGAATCTAATGCGACAATCATCCCAAGTCAACTCCAAGGTTTCAAATAATGGTCCAGTTTCTTATTTTTCAGAAAATGGGAGCAAAAATACCCTTGGAGGTGCCATGCCAAAAACTCAAAAGGGTCGTTCGTTCATCATTTCAAAGTCGAATACAAAGACATCTGCCTCTTCAACCCATCTCTCAAATCCTCGAACTTGGCGACGTTCCGGTAATAATTCTCAAGGTTCTTTACCTGGAAACAAGCTTTCGCCAGGAAAATTTCTTCCCAAAAGGCAAATTCTAGATAGGAAAGGAAACTTTCAGAATACCTCTTACATTCGTAAAGGAGTAGCAGAGGTCCCTCAGCAGAGTCAGAGAAAACCTTCACTATCCATTGGCACATTATCAGAGGAAAATATATCTTCCCCATTGGTAGAACCTCCTTCCAGTGGTTGCTGTGAAAATGCATCAGATCCTAGAAAACTGATAGATATCAATGATACACCAAACTCTTCCAAAGATGATTCAAATCAGTATGAAACTCCTGATAATCAAAGTAGTCCACTGAGTAAGCTGGAGAACCAAGTTGAAGCAAATGATGGACACATTTCTTCTTTCAGCACCAGGAGAATTGTATATACAAAGCCCAAAACAAATCAGTTGGTAGCGACTTCAAATTCTCGTGATGAGAAGTCCCAAACAGCCTTCTCCGAAGGCTACTACAAGAGGTGCAAAAATCAGTTAGTTAGGAATATGAACCAGACTGTTGCAGTGCCGAATGCCACTCTAGATTCTGATGCTCAGGGGTCTTGTAAGGTGCTTTGCAACAGAAAGTTTAGTAAGAGGCAGTTACATAAAGTTGCTGGGAGGTCATTCAAATCTTTAAGAGCCTCATTAGTCTGGACATTATGTGGCAAAAAGTCACCTAAAAATGGCCATAATTCATGGCATTCTCAAAAGGTTTTGCCTCAGTTATTTCCATGGAAAAGACCAACATATTTAAGAAGCGTCGTTCATAATTCTGCTTCATGTTCCAATAGTAGCTTCTTATCAGCAATTAGAAAGATGGATACTGTTTACACTAGGTCAACCCGTGGGTTTTCTCTTTGGAAATCCAAGGTATTAAGTGTTGGTGGGTCTAGTTTAAAATGGTCCAAATCCATTGAGAAGAACTCAAAGCAAGCTAATGAGGAGGCCACACTTGCTGTTGCTGCAGTAGAGAGGAAAAAGAGAGAGCAAAAAGGTGCAGCTTGCGTTGGTTCCCATGCAAATAAACGTATATTCCGTATTGGTTCAGTTCGCTACAAAATGGATCCTTCCAGGCGCACACTTCAGAGGATTTCAGATGATGAATCCCTGTTGTCTGCCACTACTGATTCGGGCTTGGCTGTGAAAAGAGCTTACATTCCTAGGAGATTGGTGATTGGAAATGATGAATATGTCCGAATTGGAAATGGTAATCAGCTTATCAGAGACCCAAAAAAACGAACTCGAAAATTGGCAAATGAAAAAGTTAGATGGAGCTTGCATACTGCCAGGCAACGGTTGGCTCGAAAGCAGAAGTATTGTCAGTTTTTTACTAGATTTGGGAAATGTAACAAGGAGGGTGGGAAATGCCCTTATGTTCATGATCCCTCAAAAATTGCTGTCTGTACTAAGTTCCTGAATGGTTTATGTTCTACTCCCAACTGCAAATTGACTCATAAGGTTATACCAGAGAGAATGCCAGATTGTTCTTATTTTCTGCAAGGCTTATGCACAAACCGAAATTGCCCATATAGACATGTCAATGTGAACCCTAAGGCTTCTGTTTGTGAAGGATTTCTCAAGGGTTATTGTGCTGATGGGAATGAGTGTAGGAAGAAGCACAGCTATATCTGTCCTACTTTTGAAGCAACGGGCACCTGTACGAAAGGAACCAGATGCAAGCTTCATCATCCCGAAAAACAAAAGGGAAAGAAAAGGAAGAGATCTGGAGATCAGAATAATAGTAACAGCAGAGGGCGTTACTTTGCTTCTGTTCCGATTGATGTTTCTGAAGCTGGAATCGTAGTTATTCCAGGGCAACGTGATCAGAGTGATGATCTTGAAGGAGAACTTACTGACTACATCAGCCTTCAGGATGACTATACAAAAACTGTTGGTCAATCATTAGCGCTAACATTGTGCGACAGCGATTCCTTGAACTTGCAGTTGGAAGATTATGAAGTAAATGTCAAACCAACTCTTTTAATGAAATCAAAAGGCACGCCGCGATCTTCTCGGTCCAGTGTCCTGCAAAGTTAG 5913 0.4213 MRGIPTVGSTTTILYHLSWTNTTPTTSTTTTTATXXXXXXXXXTPPPPPPYAPNNNHPPSHQNQFPQFNSPNYPNRPFQEEHPISNNHNQPFSLSPRISSRILPGDPFPRRNFPRFDTETRWNPNPGRRIAPDCLLPRNYTPVDIDSELRQHREGVSLPPSAYPAEKIRYDPDRSRLRLEYEYEGNPRKDEEFGCGSGNDANYHNYHRRGVGDLPPRHDLPNGGFGRAPPAMPREINIDLKPGGYVRGYSAEFEDEIPKVGRRDGHGEGKRWLNERRGPKELPDSRFELGTGEIGFAKNVDDFRVGTREEYGWESGRYSGRGNSREFGHELWRPSLKKQVQKKSALLRIQNAKPSYRNREIEQLRNAGYSAESNTNVFRGKEQCGHVGYGMKQEEREGSPVELDISFESNSLVAKAIVTTSTSTVVNDTNMNSVSDADLTPSEKRKKVSVSDSDCSGLEAAKVSRDVVTLNSSSCKVNDCSGSVNDLSLQNNVVNPCSQPCTRETDSVKNEVAGGSTKIHSGKSSPRVVKKKKVVKRVVKKVVGNPKSTMSNSRSANKVHGCVQPDRVIPSSSSVSVPNKVEPCLEQKSITVDKMSMPGHSSYNLSKDRNQLLEDRNGDLTLLSLGPHSRSRECETDEDSDTQKGAARFESGLDIPNSQSCASTGQAKKIDYECLDANNSVHDLRRMPDTNMVPELLNGSTSKINDVGCDIKQLCQNQEFQSRENYSNVRCPQNGFVIDVVDDSVLSSADNIGSKEKLTVTECGLTGESGFGHMVPTIITKYAILEENPDVINPASSSAMSAPSNSGKIRIHAGTDCIQNAIALTQGSYSGPVNLDDGTSVQCSDITNDAVKDVSPCYAAISSENCCTEEPFSSSNLSVGFGEGDTNNMKKRKARTHSKFLHSKMEGISPKPVNSVSHANDWDTASSVKVKDACCSEVLDQSVQSLDSNLESCLDGIVTLHGKKELSEAELCVRDNEIDDANYLSLLSKGIKVTTTSELSDAVVVSKSCADFPVSFSDKQAPEKEVELSSMDVLFSAQSLSCSEDSRKLSDNFVGGSCDARYANNETMSSDHFELKNSDFASHSLREDLDIQFPLLDGECKENGTQMQTDIFTSGFNKGDMKDSLIHQQSIVSHPSDGDLEEDAPEAPSDVCSQGISEAPERGNLNCTSIQDENNCGDISAVEHGSDLPTCTSPIQHTNKIMKSANATGHSNPVERNLMRQSSQVNSKVSNNGPVSYFSENGSKNTLGGAMPKTQKGRSFIISKSNTKTSASSTHLSNPRTWRRSGNNSQGSLPGNKLSPGKFLPKRQILDRKGNFQNTSYIRKGVAEVPQQSQRKPSLSIGTLSEENISSPLVEPPSSGCCENASDPRKLIDINDTPNSSKDDSNQYETPDNQSSPLSKLENQVEANDGHISSFSTRRIVYTKPKTNQLVATSNSRDEKSQTAFSEGYYKRCKNQLVRNMNQTVAVPNATLDSDAQGSCKVLCNRKFSKRQLHKVAGRSFKSLRASLVWTLCGKKSPKNGHNSWHSQKVLPQLFPWKRPTYLRSVVHNSASCSNSSFLSAIRKMDTVYTRSTRGFSLWKSKVLSVGGSSLKWSKSIEKNSKQANEEATLAVAAVERKKREQKGAACVGSHANKRIFRIGSVRYKMDPSRRTLQRISDDESLLSATTDSGLAVKRAYIPRRLVIGNDEYVRIGNGNQLIRDPKKRTRKLANEKVRWSLHTARQRLARKQKYCQFFTRFGKCNKEGGKCPYVHDPSKIAVCTKFLNGLCSTPNCKLTHKVIPERMPDCSYFLQGLCTNRNCPYRHVNVNPKASVCEGFLKGYCADGNECRKKHSYICPTFEATGTCTKGTRCKLHHPEKQKGKKRKRSGDQNNSNSRGRYFASVPIDVSEAGIVVIPGQRDQSDDLEGELTDYISLQDDYTKTVGQSLALTLCDSDSLNLQLEDYEVNVKPTLLMKSKGTPRSSRSSVLQS 1970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02230 1970 MobiDBLite consensus disorder prediction 1226 1296 - -
Aip07g02230 1970 MobiDBLite consensus disorder prediction 1373 1410 - -
Aip07g02230 1970 MobiDBLite consensus disorder prediction 1856 1878 - -
Aip07g02230 1970 MobiDBLite consensus disorder prediction 592 660 - -
Aip07g02230 1970 MobiDBLite consensus disorder prediction 204 236 - -
Aip07g02230 1970 MobiDBLite consensus disorder prediction 630 645 - -
Aip07g02230 1970 PANTHER CCCH ZINGC FINGER 391 1956 - -
Aip07g02230 1970 SMART c3hfinal6 1755 1779 IPR000571 GO:0046872
Aip07g02230 1970 SMART c3hfinal6 1781 1806 IPR000571 GO:0046872
Aip07g02230 1970 SMART c3hfinal6 1835 1857 IPR000571 GO:0046872
Aip07g02230 1970 SMART c3hfinal6 1726 1754 IPR000571 GO:0046872
Aip07g02230 1970 SMART c3hfinal6 1808 1834 IPR000571 GO:0046872
Aip07g02230 1970 MobiDBLite consensus disorder prediction 1226 1410 - -
Aip07g02230 1970 MobiDBLite consensus disorder prediction 57 97 - -
Aip07g02230 1970 MobiDBLite consensus disorder prediction 21 125 - -
Aip07g02230 1970 MobiDBLite consensus disorder prediction 1312 1357 - -
Aip07g02230 1970 Gene3D - 1808 1870 - -
Aip07g02230 1970 Gene3D - 1754 1807 - -
Aip07g02230 1970 MobiDBLite consensus disorder prediction 594 608 - -
Aip07g02230 1970 ProSiteProfiles Zinc finger C3H1-type profile. 1830 1858 IPR000571 GO:0046872
Aip07g02230 1970 ProSiteProfiles Zinc finger C3H1-type profile. 1726 1755 IPR000571 GO:0046872
Aip07g02230 1970 MobiDBLite consensus disorder prediction 260 286 - -
Aip07g02230 1970 MobiDBLite consensus disorder prediction 21 37 - -
Aip07g02230 1970 MobiDBLite consensus disorder prediction 1128 1157 - -
Aip07g02230 1970 ProSiteProfiles Zinc finger C3H1-type profile. 1781 1807 IPR000571 GO:0046872
Aip07g02230 1970 MobiDBLite consensus disorder prediction 42 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02230 Aip-Chr7 91553378 91564310 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aip07g02230 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02230 - - ahf:112706494 3610.08