Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02225 ATGGCTTCAATTGGGGTGTCAGAGATGCTTGAAAACCCCATCAAGTTGAGTGGTGCAGCAAGGTCAGCACCATCAGCTTCTAGCCCTGCCACCTTAGAGACTATGGCTCTCTTTGGTAAGAAGAAGGCAGCACCACCTCCTCCTTCAAAGAAAGCTGTTGTTGCTATCACTCCTGCCAATGATGAACTCGCTAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCAGAGGGTCTCTTGGACCGATCCAAGATCCCACCATACTTGACTGGAGAAGTGCCCGGAGACTATGGTTATGATCCTTTTGGTCCCAGCAAGAAGCCAGAGGACTTTGCCAAGCTTTGGCATCGTACCTCGTTAAACTTCATGCAGAATGTAGTTAATGGAAACCAGAGTCCTGTAATAGCTGTTACCAAAGGATGCCAGTGGATATGGCACCTCCAGCTTGCAACAAGTAAACAACTAAACTATTCCTGA 477 0.478 MASIGVSEMLENPIKLSGAARSAPSASSPATLETMALFGKKKAAPPPPSKKAVVAITPANDELAKWYGPDRRIFLPEGLLDRSKIPPYLTGEVPGDYGYDPFGPSKKPEDFAKLWHRTSLNFMQNVVNGNQSPVIAVTKGCQWIWHLQLATSKQLNYS 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02225 158 Gene3D Chlorophyll a/b binding protein domain 73 118 - -
Aip07g02225 158 SUPERFAMILY Chlorophyll a-b binding protein 65 114 - -
Aip07g02225 158 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 114 IPR001344 GO:0009765|GO:0016020
Aip07g02225 158 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 2 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02225 Aip-Chr7 90716265 90718005 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02225 1 113 Chloroplast and Mitochondria Gene Families AT4G10340 58.772 5.97e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02225 K08916 - ahf:112736459 162.925