Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02219 ATGGGCGTCCCTGGAAAGCATTCCTTGTGCATGCAAGAATATAGCGTGAGAGACGTCTCCAAGGCTGGATACACGCTCGAAGACAATCTAACCCAAGAGCACTATACAAATGACAAAGCCTTAGAGCTTGAAATTGTTGTTCTTGCACTTGTAGATTTGCAGCTCAACACCAAAGCCAGTTCCCTGAATGCTATACGTGAAAAGTACAAACAACATAAGGCATTTTTTGGAATTTTCGATGGGCACGGTGGTGCAAAGGCTGCCAAATTTGTGGCAAATAACTTAGAAAAGAATGTGTTAGATGAAGTGATTCTTACCGAAGAAGATAGCATTGAGGAGGCTGTGAAGCATGGTTATGTCAAGACTGATTCTGCTTTCTTGAAAAGTGATCTGATTATTTGTTTTTGA 408 0.4118 MGVPGKHSLCMQEYSVRDVSKAGYTLEDNLTQEHYTNDKALELEIVVLALVDLQLNTKASSLNAIREKYKQHKAFFGIFDGHGGAKAAKFVANNLEKNVLDEVILTEEDSIEEAVKHGYVKTDSAFLKSDLIICF 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02219 135 ProSitePatterns PPM-type phosphatase domain signature. 75 83 IPR000222 GO:0043169
Aip07g02219 135 Gene3D - 27 132 IPR036457 -
Aip07g02219 135 Pfam Protein phosphatase 2C 64 128 IPR001932 -
Aip07g02219 135 PANTHER PROTEIN PHOSPHATASE 2C 69 130 IPR015655 GO:0004722|GO:0006470
Aip07g02219 135 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 69 130 - -
Aip07g02219 135 SUPERFAMILY PP2C-like 70 128 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02219 Aip-Chr7 89976261 89979818 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02219 71 128 PP2C-type Phosphatase Gene Family AT2G30020 55.932 2.20e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02219 K17506 - adu:107469891 113.235