Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02183 ATGGAAACTGGGGATGGAAATAGCAATGCCGATAGCCCTGAACGTACGGCAGGGATGGAGGGGTGCTTGTATTCCGAAGCTGTAAATAATGGAGTGGTAATTGTTGATGGAAGTGGTGCTGATGAGAGCAAAGAAATTAGGCATTCGAAGAAGGAAGCTGTAAATACCAGAGTGTCAACTGCAGATGGGGGTTTTCGGACATACAAGAGGCGCAAACATGTAAAGATGAGTTGTTCAGAAAGCAAAGCTCAGGAAGAAAGCAGAGTGTGTGCGGAAGCCGCAAGTCACTTTTCAGAACAGGCTGTGAAGAAACCATATGGTATAGCTGTAGGAAATACTTCAAAAGATAATTCAAATGGACATTGGGGGAATGTTGTACTAAATCATTTATATCATTCATTAGGCAATGATAACAGTGGCACAAAGTGGTGCATAAAGGAAGCACTCATGAGTAATCCAAAATCCATTACCGACATGGTTTGTTCTATGTCTAGAACTGCATATATCATGCTTATATCACTATTAAATTACTTTTGTCTCTTCCATCTTGCAAATCAACATATTTTTCTGCAGGAAACTTCTAAAATTGACAAAGATGGCCAAGAATGCTCTTCACACTTCGACTGTTCCTCTCATAGGTTACAGTTTGAAGCTAATGGGCATGCATATGTCATGCATGGTGGATGTTCAAGTGAATCAGATGGCAATGGTCTTACTAAGAAGTGTCAGCGTGTGTTCCATAATATCTTAGCCTCTGAAAAATTCAGTTCATTATGTAAGGTGCTCCTAGAAAATTTTCACGGAATGAAACCTGAAAGTGTATTTGACTTTAGTGTCATAAATTCAAGGATGACAGAAGAAGCTTATGAACAATCACCCACACTTTTCTTGTCAGATTTTCAACAGGTTTGGAGAAAGCTTGAAAACACTGCAAATGAGATTGTTGCTATAGCAAAGAGTCTTTCCAACTTGTCAAGAGCGTATTACTTTGAGCATATTGGTCTTGAGAATTGCTTTTCATGCTTTCTTGTCAAACAGTTCCATAACTATGCATTGGACAATGTTATGAGACCACAGCAGACAGAAGTTTGTGCTACAGATAAAGTCTGCAGTTGCAGGCATTGTGGAGGCAAGGCAGATGGGACAGACTCCTTGATTTGTGATTCATGTGAGGAGATGTACCATGTATCTTGTATTGTGCCGGCTTTGAAGGAATTACCTGAAAAAAGCTGGTTCTGTGCCAATTGTACTGCTATTGAAATAAGATCTCCACATGATAATTGTGTGGTGTGTGGAAGGTTGAATGCCCCAAAGTCCTTGAACAACATTGTTGGTGATGAGAGCATTCCTACAAATGATGAAACACACAATGAATTGGAGGAAAATTCAAATTGTACATATGATGGGATCGAGGTGTCCATAGGGAGAAGAAACTTGCCTGATTGCAAAATTTGTAGGGAGGAAGTAGATGGAGAAGATGTACGGATATGCGGTCACAATTCATGCCCTAGTAAATACTATCATGTAAGGTGTTTGTCCACTAAGCAGGTCCAGTCATATGCTCACTGTTGGTACTGCCCTTCTTGTTTATGTCGAGTTTGCCTCGTCGATCGAGATGATCACAAGATTGTTCTCTGTGATGGTTGCGACCATGGATACCACATCGATTGCATGGAGCCTAAACGGACTACCATTCCAAAAGGCAACTGGTTCTGCAGAAAATGCGATGCAGGGATCCAAGCAATACGCCGGGCTAAAAAGACATATGAGAATTTCAATTTTAGAACTGGCGAAGATGTTTCAAAACCTAAGTATAAGCTTGGCAAGAGATGGAAACAAGGACGAGAATTGGAGAAAGATGGAGGAATGGACATGCTTTTAACAGCAGCCAACACACTTAAATTTGAAGAGAACTTA 1917 0.4053 METGDGNSNADSPERTAGMEGCLYSEAVNNGVVIVDGSGADESKEIRHSKKEAVNTRVSTADGGFRTYKRRKHVKMSCSESKAQEESRVCAEAASHFSEQAVKKPYGIAVGNTSKDNSNGHWGNVVLNHLYHSLGNDNSGTKWCIKEALMSNPKSITDMVCSMSRTAYIMLISLLNYFCLFHLANQHIFLQETSKIDKDGQECSSHFDCSSHRLQFEANGHAYVMHGGCSSESDGNGLTKKCQRVFHNILASEKFSSLCKVLLENFHGMKPESVFDFSVINSRMTEEAYEQSPTLFLSDFQQVWRKLENTANEIVAIAKSLSNLSRAYYFEHIGLENCFSCFLVKQFHNYALDNVMRPQQTEVCATDKVCSCRHCGGKADGTDSLICDSCEEMYHVSCIVPALKELPEKSWFCANCTAIEIRSPHDNCVVCGRLNAPKSLNNIVGDESIPTNDETHNELEENSNCTYDGIEVSIGRRNLPDCKICREEVDGEDVRICGHNSCPSKYYHVRCLSTKQVQSYAHCWYCPSCLCRVCLVDRDDHKIVLCDGCDHGYHIDCMEPKRTTIPKGNWFCRKCDAGIQAIRRAKKTYENFNFRTGEDVSKPKYKLGKRWKQGRELEKDGGMDMLLTAANTLKFEENL 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02183 639 SMART PHD_3 481 530 IPR001965 -
Aip07g02183 639 SMART PHD_3 531 576 IPR001965 -
Aip07g02183 639 SMART PHD_3 371 417 IPR001965 -
Aip07g02183 639 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 475 533 IPR013083 -
Aip07g02183 639 Gene3D - 259 419 - -
Aip07g02183 639 ProSiteProfiles Zinc finger PHD-type profile. 528 578 IPR019787 -
Aip07g02183 639 Pfam PHD-finger 531 576 IPR019787 -
Aip07g02183 639 Pfam PHD-finger 372 417 IPR019787 -
Aip07g02183 639 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 534 598 IPR013083 -
Aip07g02183 639 PANTHER D4, ISOFORM A 54 637 - -
Aip07g02183 639 SUPERFAMILY FYVE/PHD zinc finger 358 418 IPR011011 -
Aip07g02183 639 ProSiteProfiles Zinc finger RING-type profile. 482 529 IPR001841 -
Aip07g02183 639 PANTHER HISTONE ACETYLTRANSFERASE 54 637 - -
Aip07g02183 639 SUPERFAMILY FYVE/PHD zinc finger 530 584 IPR011011 -
Aip07g02183 639 SUPERFAMILY FYVE/PHD zinc finger 477 530 IPR011011 -
Aip07g02183 639 ProSiteProfiles Zinc finger PHD-type profile. 369 419 IPR019787 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02183 530 597 C2H2 Transcription Factor Family AT3G01460 39.706 1.42e-11 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aip07g02183 PHD 6.4e-12 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02183 - - gmx:100810450 742.265