Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02180 ATGGCTACATGGAAGGTTGCCCCTACTCTGGCAGCTGGTTGTGCTGCGATATTAAAGGCTTCCGAATTGGCATCTGTGACATGTTTGGAGTTGGCTGACATATGCAAAGAAGTGGGCCTTCCTCCGGGTTCTAAGATGAAGCGCATTGGAATTGATACTGAAGCACTCAAAGAGCATTTTGGGAAGAAAATTATGGAGCTTGAGCAGGAAAAAAGAAAACTACAGGTCCAATTGCAGTATAAAATGAAGCAAGAGGCAGAACAATTTCGACAATGGAAGGCTTCTCGAGAAAAGGAGTTACTTCAGCTGAAAAGATTTGCTTGGAGAGAACTGCAAATAGCTACAGACAACTTTAGTGAGAGAAATGTTTTAGGACAGGGAGGCCTTCGGAAGGTTTATAAAGTGGAGGCAGAATATATTCGCAAGCTCAGAAAACTTTTTGAGGTTGCCTATCTTCTTCGAGAACTCAAACCTGGGGAGGCTATTTTGGATTGGCCTACGAGAAAAAAAGTGCCTCTTGGAACAGCCCGAGGCCTAGAATATCTTCATGAGCAATGCAATCCTAAGATTATTCATCGGGATGTGAAGGAAGCTAATGTATTACTGGATGTGAAGGCAGCTAATGTCACTTCTGTAGCtatatgtcactag 651 0.424 MATWKVAPTLAAGCAAILKASELASVTCLELADICKEVGLPPGSKMKRIGIDTEALKEHFGKKIMELEQEKRKLQVQLQYKMKQEAEQFRQWKASREKELLQLKRFAWRELQIATDNFSERNVLGQGGLRKVYKVEAEYIRKLRKLFEVAYLLRELKPGEAILDWPTRKKVPLGTARGLEYLHEQCNPKIIHRDVKEANVLLDVKAANVTSVAICH 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02180 216 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 147 206 - -
Aip07g02180 216 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 147 206 - -
Aip07g02180 216 ProSiteProfiles Protein kinase domain profile. 4 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02180 216 SUPERFAMILY Protein kinase-like (PK-like) 101 204 IPR011009 -
Aip07g02180 216 Pfam Aldehyde dehydrogenase family 1 43 IPR015590 GO:0016491
Aip07g02180 216 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 99 135 - -
Aip07g02180 216 Gene3D Transferase(Phosphotransferase) domain 1 150 214 - -
Aip07g02180 216 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 65 IPR016162 GO:0016491
Aip07g02180 216 Gene3D Phosphorylase Kinase; domain 1 80 149 - -
Aip07g02180 216 SUPERFAMILY ALDH-like 1 47 IPR016161 GO:0016491
Aip07g02180 216 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 99 135 - -
Aip07g02180 216 Coils Coil 57 84 - -
Aip07g02180 216 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02180 Aip-Chr7 80616638 80619135 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02180 102 203 Receptor kinase-like Gene Family AT5G65240 49.020 9.08e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Aip07g02180 Aldedh 4.9e-10 CL0099
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02180 - - ahf:112766065 251.906