Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02172 ATGGTTTTGCAGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGATGGGGCTGGTGATGATTTGTTTAAAGAGCTATGGAGGCTGTGCAGGGCTATTAATGGATGTTCCTTGTGTTCAAGATAGAGTTTTCTATTTCCCTCAGGGTCACATTGAATTGGTATGA 222 0.3964 MVLQIDEELLQEVVNMGFDRNQLVESLCNRIQNEMGLVMICLKSYGGCAGLLMDVPCVQDRVFYFPQGHIELV 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02172 73 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 4 27 IPR015940 -
Aip07g02172 73 CDD UBA_SnRK1_plant 5 34 - -
Aip07g02172 73 Pfam UBA/TS-N domain 5 34 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02172 Aip-Chr7 79568759 79569510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02172 48 71 B3 DNA Binding Superfamily AT4G23980 70.833 8.80e-08 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02172 K07198 - ahf:114925841 144.821