Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02148 ATGGCCCATGCACTCTATCTGATTCCAACCCTAATTGCAAAACTAACATATTGTGCTTCTGTAAGGTTAGCCATCGCCTCTCATCTCCCTTGCTACTTCGTTTATCACCTTGCTACCGCAACAACATTGTTGCTGCCTTTCGCGAGCTTCTACAATTTGGTTCCGCCTTCTCTTCACGTTTGTGATAACGTCCTTGCTTTCACCATTGAGAACTTCTTCGAACGTGATCTCCAGACTCTCGTCTTCAAGCTCGGCATGGCCAAGTCAATCCACCATGCCAAGGTCCTGATCCGCCAGCGCCACATTAGAGAAGGTAGGCTTACACTAGAGAAGGTGAATGCAGCAATCAATGACATGGCATCCTATGCTGAAGCAAATGCATCATAG 387 0.4703 MAHALYLIPTLIAKLTYCASVRLAIASHLPCYFVYHLATATTLLLPFASFYNLVPPSLHVCDNVLAFTIENFFERDLQTLVFKLGMAKSIHHAKVLIRQRHIREGRLTLEKVNAAINDMASYAEANAS 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02148 128 Gene3D - 74 125 IPR036986 GO:0003723
Aip07g02148 128 CDD S4 77 103 - -
Aip07g02148 128 SUPERFAMILY Alpha-L RNA-binding motif 59 103 - -
Aip07g02148 128 PANTHER 30S 40S RIBOSOMAL PROTEIN 48 108 IPR022801 -
Aip07g02148 128 PANTHER 40S RIBOSOMAL PROTEIN S9 48 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02148 Aip-Chr7 73242245 73243825 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02148 44 106 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 63.492 1.49e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02148 K02997 - oeu:111390928 79.3369