Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02146 ATGGGCTCTGTAACAATGGGCTCTGTAACAACCATTTGCAGTGATAAGACTAGCACGTTGACCATGAATCAGATGACTGTGGTGGAGGCTTATGCTGGTGGGAAGAAGAATGATCCTCCTGGTAACAAGTCAGAGCTCTCTCCCAAGCTCCACTCTTTGCTCATTGAAGGTGTTGCACAGAACAATAATGGCAGTGTTTCTGTCCCTGAGGGTGGTAACGATGTTGAGGTTTCCGGATCACCAACAGAAAAGGCAATTTTACATTGGGGATTAGAGATTGGGATGAACTTCGACTCTACTAGATCGGAATCATCAATTATTCACGCTGACTCTGAAGTTCACATACACTGGAAAGGTGCTGCTGAGATTGTCCTAGCCTGCTATACACGGTACATTGATGCAAATGACCTGTTGATGGTATCTTTCAGAAAAGCTATTGAAGACATGGCTGCCGAGAGTTTACGTTGTGTTGCCATTGCATATAGAACATTTGAAAAGGAGAATGTTCCAGCCACTGAAGAAGAACGGGCTCACTGGTCTTTACCAGAAGATAATCTTGTTTTGTTAGCTATTGATCCTTGTCGACCTGGAGTCAAAGATTCAGTGGAGCTTTGCCAAAAATCTGGGGTTAAGGTAAAAATGGTCACTGGTGACAATGTCAAAACTGCAAAAGCAATTGCTGTGGAGTGTGGAATACTTAATTCCCTTGCTGAAGCTACAGAGCCAATCATCATTGAAGGAAAAACTTTTCGTGCCATGACAGATGCACAGAGAGATGAAATAGCTGAAGCAATATTAGTTATGGGGTCATCTCCTAATGACAAATTATTGCTTGTGCAAGCATTGAGGAGGAAGGGACATGTTGTGGCTGTAACTGGGGATGGAACAAATGATGCTCCTGCACTACATGAGGCTGATATAGGTCTTGCAATGGGTATTCAAGGAACTGAAGTTGCAAAAGAAAGCTCTGATATTATTTTGGATGGCAATTTTGCTTCAGTTGTAAAGGTTGGACCTATTTCTTTTCGATTTGAGAGATCTACATTGGCAACTGATCCACCAACTGATCACCTTATGGATTGGCCTCCAGTGGGCCGAAGAGAACCTCTCATAACAAATATTATGTGGAGAAATTTGCTGATACAGGCGAGTTTTGTTTCTCATTTCTCAGCAATGTACCAAGTATCTGTGTTGCTTGTTCTGAATTTCCGAGGTAGGAGCATACTGGGTCTGACACATGACAAAAATGATCATGCAATTAAAGTGAAAAACACTCTGATCTTCAATATTGGTGGTTGTGCTGTAATGATCTTTAATGAGTTCAATGCACGAAAGCCAGATGAGTTTAACATATTCAGTGGAGTCACGAAAAACTACCTGTTGTGCTTCAGATCATCATCATCGAATTCCTCGGCAAGTTCACTTCAACAGTCAGGCTTAATTGGAAGCAGTGGCTGA 1458 0.4211 MGSVTMGSVTTICSDKTSTLTMNQMTVVEAYAGGKKNDPPGNKSELSPKLHSLLIEGVAQNNNGSVSVPEGGNDVEVSGSPTEKAILHWGLEIGMNFDSTRSESSIIHADSEVHIHWKGAAEIVLACYTRYIDANDLLMVSFRKAIEDMAAESLRCVAIAYRTFEKENVPATEEERAHWSLPEDNLVLLAIDPCRPGVKDSVELCQKSGVKVKMVTGDNVKTAKAIAVECGILNSLAEATEPIIIEGKTFRAMTDAQRDEIAEAILVMGSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIILDGNFASVVKVGPISFRFERSTLATDPPTDHLMDWPPVGRREPLITNIMWRNLLIQASFVSHFSAMYQVSVLLVLNFRGRSILGLTHDKNDHAIKVKNTLIFNIGGCAVMIFNEFNARKPDEFNIFSGVTKNYLLCFRSSSSNSSASSLQQSGLIGSSG 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02146 485 Gene3D - 23 189 IPR023299 GO:0000166
Aip07g02146 485 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 20 191 IPR023299 GO:0000166
Aip07g02146 485 Pfam Cation transporting ATPase, C-terminus 348 462 IPR006068 -
Aip07g02146 485 SUPERFAMILY HAD-like 11 340 IPR036412 -
Aip07g02146 485 PANTHER CALCIUM-TRANSPORTING ATPASE 5 337 - -
Aip07g02146 485 PANTHER CALCIUM-TRANSPORTING ATPASE 348 461 - -
Aip07g02146 485 PANTHER CATION TRANSPORTING ATPASE 5 337 - -
Aip07g02146 485 PANTHER CATION TRANSPORTING ATPASE 348 461 - -
Aip07g02146 485 SUPERFAMILY Calcium ATPase, transmembrane domain M 348 464 IPR023298 -
Aip07g02146 485 PRINTS H+-transporting ATPase (proton pump) signature 142 160 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip07g02146 485 PRINTS H+-transporting ATPase (proton pump) signature 292 308 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip07g02146 485 Pfam haloacid dehalogenase-like hydrolase 9 306 - -
Aip07g02146 485 Gene3D - 344 468 - -
Aip07g02146 485 PRINTS P-type cation-transporting ATPase superfamily signature 292 311 - -
Aip07g02146 485 PRINTS P-type cation-transporting ATPase superfamily signature 13 27 - -
Aip07g02146 485 PRINTS P-type cation-transporting ATPase superfamily signature 208 218 - -
Aip07g02146 485 PRINTS P-type cation-transporting ATPase superfamily signature 316 328 - -
Aip07g02146 485 Gene3D - 190 336 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02146 Aip-Chr7 72610220 72616097 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02146 5 461 Primary Pumps ATPases AT5G57110 58.519 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02146 K01537 - gmx:100820121 644.039