Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02125 ATGTCAAAGTCTCCCTCTCCTGAGAAGCACCAGTCCGTTTATTCTTCTTCTGAGCCTAGGGAGTTTATTATGGCTACAGAAATAGAGGATCCCGAGTCTACTATGTCAACAGTTGCTAAGCTTGTGGAGCAACTGCATGCCAAGTTGTCATCAGCACAAGAGAAGGAACTTATCACAACACGATTGCTAGGTATTGCCAGGAGAAGAAAGGATGGCAGGGCACTTATTGGCACTCATTCTCAAGCGATGCCATTGTTCATAAACATTCTTAGAAATGGAACCTCTCTTGCGAAAGTTAATGTTGCTACTATTCTCAGTGTACTGTGCAAAGATGAAGACTTGAGGTTAAAAGTTCTTCTTGGTGGTTGTGTCCCACCATTGCTGTCAATTTTAAAATATGAATCAACTGATGCAAGAAAGGCGGCAGCTGAAGCAATATATCAAGTTTCCATTGGAGGTCTGTCAGAAGATAATGTTGGTATGAAAATTTTTGTTACAGAAGATGTAGTTCCAACGTTGTGGAATCTACTAAGTCCTAAGAACAAGCAAGACAAAATTGTTGAGGGTTTTATTACTGGAGCATTAAGAAATTTGTGTGGTGATAAGGATGGCTACTGGAATGCAACATTAGAAGCTGGAGGTATTGAAATCATTGTGGATCTCTTGTCTTCAGACAATGCTGTTTCTCAGTCAAATGCAGCTTCTCTGTTGGCTCGTCTAATGTCGGCTTTCAGTGGTAGCATCCCAAAAGTAATAGACTCTGGAGCAGTTAAAGCTTTAGTTCGACTTGTAGGGGAGGAAAACAATATTTCTGTTCGAGCTGGTGCTGCTGATGCTCTAGAGGCCCTTTCTTCAAAGTCAACCAATGCGAAGAAAGCTATTGTTGATTCTGATGGTGTTCAAATCCTTATTGGAGCCATAGTTGCTCCTTCAAAAGAATGTATGCAATCTGATGGTGGCCAGGCTCTTCAAGGGCATGCAACACGAGCTCTAGCCAATTTATGTGGTGGCATGCCTGCATTAATAATATATCTTGCAGAACTTTCCTGTTCTCCTCGTTTGACAGCTCCAGTTGGTGATATAATAGGCGCTCTTGCTTACACCCTTATGGTCTTTGAGGAAAAAGTTGATGATGATCAGGATCATTTTGATGCAACTAAGATAGAGGATACTTTAGTAACTCTTTTAAAGCCTCGAGATAACAAGCTTATTCAAGAGCGTGTCCTTGAGGCCATGGCTAGCCTATATGGTAATGTCTATCTCTCGAAGTTTCTCAATCAAGCAGATTCAAAGAAGGTTCTCGTTGGGCTTATAACTATGGCTGCCATTGATGTGCAAGGATATTTGATACGTTCACTGACAAGCTTGTGCTGTGACAGGGTAGGAATATGGGAGGCGATAAAAAAAAGAGAAGGCATTCAGTTACTTATATCTATGCTGGGATTATCTAGTGAGCAGCATCAAGAGTACTCGGTTGAACTGCTAGCAATCTTAACTGACCAAGTTGAGGACAGCAAGTGGGCAATCACTGCTGCTGGAGGGATTCCACCATTGGTGCAGTTGCTGGAGACAGGATCACAAAAAGCAAGAGAGGAAGCAGCTCATGTTCTTTGGAGTTTGTGTTGTCACAGTGAAGACATCCGTGCTTGCGTTGAAATTGCTGGGGCCATTCCAGCATTTCTGTGGCTTCTTAAGAGTGGTGGGCCAAAAGGACAAGAAGCTTCTGCTTTGGCACTGATGAAGCTTGTCAGAGTTGCTGATTCTGCAACGATAAATCAGCTATTAGCAATGCTCCTAGGAGATTCTCCAACCTCAAAGGGCCATATAATCCAAGTTTTAGGTCATGTACTTACTGTGGTTTCACAGAAAGATCTTGTGGAAAAGGGATGTGCAGCAAATAAAGGCCTAAGATGTCTTGTTCAGGTTATCAATGCATCAAATGAGGAAACCCAAGAATTTGCAACTTCAGCGATAGCTAATTTATTTACCACAAGACAAGACATTTGTGATGGTCTAGTAAATGAAGACCTTGTGCTTCCTTTAATGAAGCTTCTGACTAACAAAAATCAAGGTGTGGCCATTCAATCAGCTCGAGCATTAAGTTCTCTATCACGTCCAACCAATAGCAAAGCTGCAAATAAGTTGTCTTATATAGTACTTGAAGGAGATGTTCAGCCACTAATTAAGTTGGCTAAAACATGCTGTGTGGATGCTGCAGAAACTTCTGTTGCTGCTTCTGAATCCGCTGTTGCTGCATTGGCCAACCTTCTTTTTGATCCTTATATTGCTGCCGAGGCCCTGGCTGAAGATGTTGTTCCAGCTTTAACAAGAATTCTGGAGAAAGGAACCTTGGAAGGTAAACAAAATGCATCACGAGCTCTTCATGAATTATTGAAGCATTTTTCAGTAGGAGATCTTCTTAAGGGAGACGAACAGTGCCGTTTAACTTTGCTAGCCCTTGTTGATTCGTTAAGATCTATGCATATAGATGAGACTGAAGCTGCAGATGCTTTAGATGTGATTGCATTGCTAGCTAGGACAAAACATGATGTCAGCCTCACTTATCCTCCATTGTTGGTTCTGGCTGATAAATCTTGCTTAGAACCCCTTGTCTGCTGCCTTGCTGATGGTCCACCCATTGTGCAAGACAAGGCAATTGAAATTTTGTCCAGACTTTGTGGAGATCAGCCAGTTGTTCTTGGTGACTTGTTGTCTTCTAGTTCCAGATGCACTGGATCATTAGCTCATAGAATAATTAACTCTGCTAGTTTAGAAGTAAAAGTTGGAGCAGCTGCCTTACTAATTTGCGCTGCAAAGGATAAGAAAGAGCTCTCAATGGATTTGCTTGACACTTCTGGATATCAAAAACCATTGATTTACTCCTTAGTTGACATGATGAAGCAAAGTTCTAATTGTTCATTGTTAGAAATCGAAGTTTGCACCCCTAGAGGTTTTATGGAGAAGAATGCATTTCCAGAAGTTGATGAGTCAGAAATTCCTGATGCAGCCACAGTCTTGGGTGGTACTGTTGCCTTGTGGTTACTCTCAATTATTGCTTCTGTTCAGGTAACAAACAAATTAATAATTTTGGAAGCTGGTGGACTGGAAATTCTCTCTGAGAAACTTGCAAGACATGTCTCAAATCCACAGGCACAATATGAGGATACTGAAGAAATATGGATCAGCGCATTACTCTTGGCCATTTTATTTCAAGATACAAAGGTCATTCAATCTCCTGCAACAATGTGCACTGTACCTTCTCTGAGTCTACTTCTAACATCTGAGGAAGTAATTGACAAATATTTTGCTGCCCAAGCTATGGCAAGTCTTGTTCAAAATGGTGATAAGGGAATAGGTCTTGCCATTGCAAATTCTGGTGCTGTCCCAGGATTGATAACTATGATTGGGCATATAGAAACAGATATGCCAAATCTCATGGCTTTATCAGATGAGTTTTCCTTGGTGCGAACTCCAGATCAAGTTGTTTTGGATCATCTATTTGAAATTGAGGATGTAAGACTGGGATCTGTTGCACGGAAATCTATACCTCTTTTAGTAGATCTCTTGAAACCAATACCAGAAAGGCCTGGTGCTCCAGCAGCTGCCCTTAGACTCTTGATTTCCCTTGCAGATGGGAGTGATACAAATAAATTAATCCTTGCTGAAGCTGGAGCTCTGGAGGCTTTGAACAAATACCTGTCCTTGAGCCCTCAAGACACTACTGAGGCTACTATTTCTGACTTACTGAGAATATTATATTGCAATTCTGACCTAATTAATCATGAAGCATCGACAAATTCACTGAACCAACTCATAGCTGTTTTGCGTCTTGGTTCAAGAAATTCTAGATATAGTGCAGCTAGAGCACTCCATGAACTCTTTGATTCTCTGAATATTAGAGACTCAGAATTAGCTAAACAGGCCGTTCATCCATTGGTTGACATGCTGAATAATACATCAGGAAGTGAGCAGGAGGCTGCTTTAATGGCCTTGGTCAAGTTAATGTCAGGAAATTCTTCAAAAGCATCTCTGTTTACAGATGTGGAAGGCAACCCACTTGAAAGTTTACACAAAATATTGTCCTCCGCTTCATCCTTGGAGTTGAAGAATTATGCTGCGCAACTCTGCTTTGTACTGTTTGGTAATAGTAAGATCAGAGCAGAACGAATTGCCTCAGAATGCATAGAACCCCTTATATCACTGATGCAGTCTGATTCTGAGAGTGCAATAGAGTCTGGGGTTTGTGCTTTTGACAGATTGTTAGAAGATGAACATCAGGTAGAGCTTGCAGCAGCCTGTAACATCGTGGATTTCCTTGTCAGCTTGGTTTCTGGTACAAACTATCAGCTTATTGAGGCAACCATATCTGTTCTCCTCAGATTGGGCAAAGATAGGACTCCAACCAAATTAGACATGGTCAAATCTGGAATTATTAATAACTGTCTCAAGCTACTACCATTAGCACCTAGCTCATTATGCTCTACTATAGCTGAGCTGTTTCGCATCTTAACAAATAGTAATGCAATTGCCAGAAGTTCAGAGGCTGCAAAAATTGTAGAACCCCTTTTCCATGTTTTGCTATGTCGAGATTTCAACTTATGGGGACAGCATAGTGCCTTACAAGCACTTGTAAACATATTGGAAAAGCCACAAAGTCTTGCAACTTTAAAGCTTACACCTAGTGAAGTTATTGAACCCTTGATTTCTTTTCTGGAATCCCCATCCCAAGCTATTCAGCAACTTGGCACAGAACTCTTAGCTCATATTCTTGCACAGGAGCATTTTCAACAGGATATTTCAACAAAAAATGCAGTTCCACCTCTTGTACAGCTTGCAGGAATTGGAATATTGAACTTGCAACAAACAGCAATAAAAGCATTGGAAAAACTTTCTAAAACCTGGCCAAAGGCAGTTGCTGATGCCGGAGGTATTTTTGAGCTTGCAAAGGTTATTATTCAAGATGATCCTCAACCGCCACATGCACTCTGGGAATCAGCTGCTTTAGTTCTCTCTAATATATTATATTCTGATGCGGATTACTATTTCAAAGTTCCTGTGGCGGTTCTTGTAAAACTGTTAAACTCAAAAGTTGAGAATACAGTTAGCATAGCCCTTAACGCATTAGTAGTTCATGACACAAGTGATGCTTCAAGTGCTGAACAGATGGTGGAAGCTGGAGCTATAGATGCTCTGCTGGACCTTCTAAGATCTCATAATTGTGAAGAAGCATCTGGTAGATTACTCGAAGCTTTATTCAACAATGTGAATGTACGAGAGATGAAGATGTCGAGGTATGCTATAGCACCATTATCACAGTATCTATTAGATCCGCGTACCAAATCAGAGCCTGGCAAGCTTCTTGCTGCTTTAGCTCTAGGAGATCTTTCACAGTACGAGGGACATGCTAGAGCTAGTGACTCAGTTTCTGCATGCCGTGCATTGATAAGTTTACTTGAAGATCAGCCAACTGAAGAAATGAAGATGGTGGCTATATGTGCATTGCAGAACTTCGTCATGAACAGCAGGACCAACAGAAGAGCTGTTGCAGAAGCTGGGGGCATATTGGTGATTCAGGAATTGCTGCTGTCTCCAAATACAGAAGTTGCTGCACAAGCAGCATTGCTGATCAAATTTTTGTTCTCTACCCACACTCTACAAGAATATGTGTCAAATGAGCTAATAAGGTCTTTGACAGCTTCATTGGAAAGAGAGTTGTGGTCAACTGCCACAATCAATGAAGAGGTTTTGAAAACACTGCATGTGATATTCATGAACTTCCCTAAGCTCCATGTGTCCGAAGCTGCAACAGTTTGTATTCCTCATTTGGTAGGAGCTCTTAAATCTGGCGGTGAAGCAGCTCAGGACTCCGTACTTGATACCTTTTGCTTGCTGAAACAATCTTGGTCAACTATGCCAATAGATATTGCAAAGTCTCAGGCTATAGTTGCTGCTGAAGCGATCCCCATCTTGCAAATGCTCATGAAAACCTGCCCACCAAGCTTCCATGAGAGGGCAGATTCTCTTCTGCACTGCTTACCAGGTTGTTTGACTGTCATCATTAAGCGTGGAAATAACCTCAAGCAAACTATGGGAGGTACATGTGCATTTTGCAGGTTGACAATAGGCAATGGTCCTCCAAACCAAACCAAGATGGTTCATGGTACTTCTCCAGAATGGAAAGAAGGATTCACGTGGGCATTTGATGTGCCTCCAAAGGGCCAAAAACTTCATATTGTATGCAAAAGCAAGAATACTTTTGGGAAGACAACTCTCGGAAGAGTCACTATCCAAATCGATAAAGTTGTGACTGAAGGAGTTTATAGCGGAATATTCAGTCTTAATCATCATGATGGCAATAAAGACGGTTCATCCCGAACTCTTGAAATTGAGACTCTCCCTTTCACTTCCTTTTCGACGTCGCTGAGGAGAAGACGAAGAAGTCTTCACCATCGTTGCCGATTGAAGCATCTGGTGCGATGTCCATGTTTTCTCTCACAAGACTCTCCCTCTCATTTCATTTTCGACATCGCTGAGGAGAAGACGAAGAAGCCTTCATCATCGTCGCCGATTGAAATATCCGGCGCATCGTGTTCGCAAGTTCGCCGTTGA 6609 0.4166 MSKSPSPEKHQSVYSSSEPREFIMATEIEDPESTMSTVAKLVEQLHAKLSSAQEKELITTRLLGIARRRKDGRALIGTHSQAMPLFINILRNGTSLAKVNVATILSVLCKDEDLRLKVLLGGCVPPLLSILKYESTDARKAAAEAIYQVSIGGLSEDNVGMKIFVTEDVVPTLWNLLSPKNKQDKIVEGFITGALRNLCGDKDGYWNATLEAGGIEIIVDLLSSDNAVSQSNAASLLARLMSAFSGSIPKVIDSGAVKALVRLVGEENNISVRAGAADALEALSSKSTNAKKAIVDSDGVQILIGAIVAPSKECMQSDGGQALQGHATRALANLCGGMPALIIYLAELSCSPRLTAPVGDIIGALAYTLMVFEEKVDDDQDHFDATKIEDTLVTLLKPRDNKLIQERVLEAMASLYGNVYLSKFLNQADSKKVLVGLITMAAIDVQGYLIRSLTSLCCDRVGIWEAIKKREGIQLLISMLGLSSEQHQEYSVELLAILTDQVEDSKWAITAAGGIPPLVQLLETGSQKAREEAAHVLWSLCCHSEDIRACVEIAGAIPAFLWLLKSGGPKGQEASALALMKLVRVADSATINQLLAMLLGDSPTSKGHIIQVLGHVLTVVSQKDLVEKGCAANKGLRCLVQVINASNEETQEFATSAIANLFTTRQDICDGLVNEDLVLPLMKLLTNKNQGVAIQSARALSSLSRPTNSKAANKLSYIVLEGDVQPLIKLAKTCCVDAAETSVAASESAVAALANLLFDPYIAAEALAEDVVPALTRILEKGTLEGKQNASRALHELLKHFSVGDLLKGDEQCRLTLLALVDSLRSMHIDETEAADALDVIALLARTKHDVSLTYPPLLVLADKSCLEPLVCCLADGPPIVQDKAIEILSRLCGDQPVVLGDLLSSSSRCTGSLAHRIINSASLEVKVGAAALLICAAKDKKELSMDLLDTSGYQKPLIYSLVDMMKQSSNCSLLEIEVCTPRGFMEKNAFPEVDESEIPDAATVLGGTVALWLLSIIASVQVTNKLIILEAGGLEILSEKLARHVSNPQAQYEDTEEIWISALLLAILFQDTKVIQSPATMCTVPSLSLLLTSEEVIDKYFAAQAMASLVQNGDKGIGLAIANSGAVPGLITMIGHIETDMPNLMALSDEFSLVRTPDQVVLDHLFEIEDVRLGSVARKSIPLLVDLLKPIPERPGAPAAALRLLISLADGSDTNKLILAEAGALEALNKYLSLSPQDTTEATISDLLRILYCNSDLINHEASTNSLNQLIAVLRLGSRNSRYSAARALHELFDSLNIRDSELAKQAVHPLVDMLNNTSGSEQEAALMALVKLMSGNSSKASLFTDVEGNPLESLHKILSSASSLELKNYAAQLCFVLFGNSKIRAERIASECIEPLISLMQSDSESAIESGVCAFDRLLEDEHQVELAAACNIVDFLVSLVSGTNYQLIEATISVLLRLGKDRTPTKLDMVKSGIINNCLKLLPLAPSSLCSTIAELFRILTNSNAIARSSEAAKIVEPLFHVLLCRDFNLWGQHSALQALVNILEKPQSLATLKLTPSEVIEPLISFLESPSQAIQQLGTELLAHILAQEHFQQDISTKNAVPPLVQLAGIGILNLQQTAIKALEKLSKTWPKAVADAGGIFELAKVIIQDDPQPPHALWESAALVLSNILYSDADYYFKVPVAVLVKLLNSKVENTVSIALNALVVHDTSDASSAEQMVEAGAIDALLDLLRSHNCEEASGRLLEALFNNVNVREMKMSRYAIAPLSQYLLDPRTKSEPGKLLAALALGDLSQYEGHARASDSVSACRALISLLEDQPTEEMKMVAICALQNFVMNSRTNRRAVAEAGGILVIQELLLSPNTEVAAQAALLIKFLFSTHTLQEYVSNELIRSLTASLERELWSTATINEEVLKTLHVIFMNFPKLHVSEAATVCIPHLVGALKSGGEAAQDSVLDTFCLLKQSWSTMPIDIAKSQAIVAAEAIPILQMLMKTCPPSFHERADSLLHCLPGCLTVIIKRGNNLKQTMGGTCAFCRLTIGNGPPNQTKMVHGTSPEWKEGFTWAFDVPPKGQKLHIVCKSKNTFGKTTLGRVTIQIDKVVTEGVYSGIFSLNHHDGNKDGSSRTLEIETLPFTSFSTSLRRRRRSLHHRCRLKHLVRCPCFLSQDSPSHFIFDIAEEKTKKPSSSSPIEISGASCSQVRR 2202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02125 2202 PANTHER - 13 2131 - -
Aip07g02125 2202 Gene3D - 1617 2013 IPR011989 -
Aip07g02125 2202 Gene3D - 421 714 IPR011989 -
Aip07g02125 2202 SUPERFAMILY ARM repeat 1658 2012 IPR016024 -
Aip07g02125 2202 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 255 299 IPR000225 GO:0005515
Aip07g02125 2202 SUPERFAMILY ARM repeat 77 308 IPR016024 -
Aip07g02125 2202 SUPERFAMILY ARM repeat 1055 1276 IPR016024 -
Aip07g02125 2202 Gene3D - 1304 1614 IPR011989 -
Aip07g02125 2202 Gene3D - 1008 1158 IPR011989 -
Aip07g02125 2202 Gene3D - 191 415 IPR011989 -
Aip07g02125 2202 MobiDBLite consensus disorder prediction 2181 2202 - -
Aip07g02125 2202 SUPERFAMILY ARM repeat 635 968 IPR016024 -
Aip07g02125 2202 SUPERFAMILY ARM repeat 1265 1632 IPR016024 -
Aip07g02125 2202 Pfam C2 domain 2015 2113 IPR000008 -
Aip07g02125 2202 MobiDBLite consensus disorder prediction 2186 2202 - -
Aip07g02125 2202 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2013 2120 IPR035892 -
Aip07g02125 2202 ProSiteProfiles C2 domain profile. 1995 2111 IPR000008 -
Aip07g02125 2202 Pfam Armadillo/beta-catenin-like repeat 506 541 IPR000225 GO:0005515
Aip07g02125 2202 SMART C2_3c 2015 2110 IPR000008 -
Aip07g02125 2202 SUPERFAMILY ARM repeat 387 731 IPR016024 -
Aip07g02125 2202 Gene3D - 715 977 IPR011989 -
Aip07g02125 2202 Gene3D - 1170 1303 IPR011989 -
Aip07g02125 2202 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 513 555 IPR000225 GO:0005515
Aip07g02125 2202 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 13 2131 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Aip07g02125 2202 Gene3D C2 domain 2014 2135 IPR035892 -
Aip07g02125 2202 SMART arm_5 665 705 IPR000225 GO:0005515
Aip07g02125 2202 SMART arm_5 544 584 IPR000225 GO:0005515
Aip07g02125 2202 SMART arm_5 111 151 IPR000225 GO:0005515
Aip07g02125 2202 SMART arm_5 711 758 IPR000225 GO:0005515
Aip07g02125 2202 SMART arm_5 1213 1253 IPR000225 GO:0005515
Aip07g02125 2202 SMART arm_5 1841 1881 IPR000225 GO:0005515
Aip07g02125 2202 SMART arm_5 158 200 IPR000225 GO:0005515
Aip07g02125 2202 SMART arm_5 1591 1632 IPR000225 GO:0005515
Aip07g02125 2202 SMART arm_5 1423 1463 IPR000225 GO:0005515
Aip07g02125 2202 SMART arm_5 244 285 IPR000225 GO:0005515
Aip07g02125 2202 SMART arm_5 854 894 IPR000225 GO:0005515
Aip07g02125 2202 SMART arm_5 759 799 IPR000225 GO:0005515
Aip07g02125 2202 SMART arm_5 201 242 IPR000225 GO:0005515
Aip07g02125 2202 SMART arm_5 623 663 IPR000225 GO:0005515
Aip07g02125 2202 SMART arm_5 1715 1756 IPR000225 GO:0005515
Aip07g02125 2202 SMART arm_5 460 500 IPR000225 GO:0005515
Aip07g02125 2202 SMART arm_5 1382 1422 IPR000225 GO:0005515
Aip07g02125 2202 SMART arm_5 287 336 IPR000225 GO:0005515
Aip07g02125 2202 SMART arm_5 501 542 IPR000225 GO:0005515
Aip07g02125 2202 CDD C2 2016 2105 - -
Aip07g02125 2202 Gene3D - 20 189 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02125 Aip-Chr7 70338692 70352911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02125 432 684 U-box Gene Family AT2G23140 27.413 8.42e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02125 - - gmx:100796864 3376.65