Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02113 ATGGTTTATTCCACCGTGAAGCACCTCAAAACGGGTCACAGTGCGTCGCTTCAGTGCACTGTGTGCTTGAGCGAGTTCAAGGACATGGACAAGCTCAGACTTTTGCCAAAGTGCAGTCACGTGTTTCACCCCGAGTGCATCGACGCGTGGCTCGCCTCGCACGTGACTTGTCCTGTCTGCAGGGCCAAGATGAAGTCGGAAAACATGGAGTTCAAGGTGGAGATTCAGGAGTTAGAGGGAAGTGCCAACCATATGTTCGATGAAATGTCTGAGAGAATGGGTGAGGTTTCTTGTGATGGGAACGAAGGTGGGGTTGGTGAGGGAGATGATGGGGTTTTTGGGGAGTGTCATGGGACCTCAAAGGTGAGAGCTTTTGGGTTGTTGGTGAGTTCCCACTCTACGGGTCACTCTCTTGTGGAACCGGGGAAGAGCTTGGAGTGGTTCACTTTGCGATTGCCTGAGGAATTGAGGAAGCAGATTCTGGAAGCCAATCATAAGTGTAGTGGTGGTAGTGGTGGGATGAAGCGTTCGACAAGCTACGACGTCGTTTTGCAGAGTGAAGTTGGTGAAGGTAGTAGTAGTAATAAGGGGAGTAAGAATAGTAGGTGGGTGTTGTCTATGACACCTCCGTTTGTTTCTCGCAGTTGGGGTCATTTTAGTACTTCTTTTAGTTTGGCACCGTCAAATGAGTGCTCAACATGCTCTGGGATTCCTAGGCTTTGGGGTTCTTCAGCGGCAAGGGAAGAGAAAGGATGTGAAGGGAGAGAGGGTTTGCAACTGGTATGA 786 0.5 MVYSTVKHLKTGHSASLQCTVCLSEFKDMDKLRLLPKCSHVFHPECIDAWLASHVTCPVCRAKMKSENMEFKVEIQELEGSANHMFDEMSERMGEVSCDGNEGGVGEGDDGVFGECHGTSKVRAFGLLVSSHSTGHSLVEPGKSLEWFTLRLPEELRKQILEANHKCSGGSGGMKRSTSYDVVLQSEVGEGSSSNKGSKNSRWVLSMTPPFVSRSWGHFSTSFSLAPSNECSTCSGIPRLWGSSAAREEKGCEGREGLQLV 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02113 261 Coils Coil 61 81 - -
Aip07g02113 261 Pfam Ring finger domain 18 61 IPR001841 -
Aip07g02113 261 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL31-LIKE 1 182 - -
Aip07g02113 261 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 71 IPR013083 -
Aip07g02113 261 SMART ring_2 19 60 IPR001841 -
Aip07g02113 261 CDD RING-H2_EL5_like 18 61 - -
Aip07g02113 261 PANTHER RING FINGER DOMAIN-CONTAINING 1 182 - -
Aip07g02113 261 ProSiteProfiles Zinc finger RING-type profile. 19 61 IPR001841 -
Aip07g02113 261 SUPERFAMILY RING/U-box 16 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02113 Aip-Chr7 68960552 68961337 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02113 1 215 Rapid Response to Elicitors AT3G05200 34.764 4.33e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02113 K10664 - aip:107636030 178.718