Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02097 ATGGGAAGGTCTCCATGCTGCGATGAAAACGGCCTAAAGAAAGGACCATGGACTCCTGAAGAAGATCAAAAGCTAGTCGATCATATTCAGAAACATGGCCATGGAAGTTGGAGAGCTCTTCCTAAGTTAGCAGGGCTTAATAGATGTGGAAAAAGCTGTAGACTAAGGTGGACTAACTATTTGAGGCCTGACATTAAGAGGGGGAAATTCTCCCAAGAAGAGGAGCAAACTATTCTGCATCTGCATTCCATTCTTGGAAATAAGTACTACTTTCATTTAATATCATTTTCCTTCTTCCTTTTATCCATCCATTCTTAA 318 0.4057 MGRSPCCDENGLKKGPWTPEEDQKLVDHIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKYYFHLISFSFFLLSIHS 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02097 105 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 1 89 - -
Aip07g02097 105 SMART sant 13 63 IPR001005 -
Aip07g02097 105 Gene3D - 13 66 - -
Aip07g02097 105 CDD SANT 16 61 IPR001005 -
Aip07g02097 105 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Aip07g02097 105 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aip07g02097 105 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aip07g02097 105 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 89 - -
Aip07g02097 105 SUPERFAMILY Homeodomain-like 15 90 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02097 Aip-Chr7 68209794 68210500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02097 1 89 MYB Transcription Factor Family AT1G34670 93.258 3.32e-59 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip07g02097 Myb_DNA-binding 8.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02097 K09422 - gmx:100811162 194.512