Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02072 ATGTTCAAGATTGCGCTTAAGGAGTGCAGGCACGTGTTTGAGAATCTCGGCTCCATTGTTGATGTTGGTGGTGTCTCCAAGCTTATTCATCAAGAGTTTTCGCAGTTGAAGTGCACCGTTTTTGACCAGTCGGAGGTTGTTGGTAACCTCAAAGGAGATGGGAATTTGAACTTTGTTGCCGGTGACATGTTCAAATCGATCCCTTCTGCCGATGCAGTCTTACGGCGGCGACAAAGAATCTTGGATTTTGTAGCAGGAAGTGAAAAAATCAAAGTTCTAACAGCAAAAACAGGAGAAGGGATTGGAAGCATTATGAGGCAGAGGAGCTGGACAAAACCAAACAGGGGCAATGCAAGACGGAAAGAGGCGCTGTTGTAA 378 0.4577 MFKIALKECRHVFENLGSIVDVGGVSKLIHQEFSQLKCTVFDQSEVVGNLKGDGNLNFVAGDMFKSIPSADAVLRRRQRILDFVAGSEKIKVLTAKTGEGIGSIMRQRSWTKPNRGNARRKEALL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02072 125 Gene3D Vaccinia Virus protein VP39 1 96 IPR029063 -
Aip07g02072 125 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 1 75 - -
Aip07g02072 125 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 74 IPR029063 -
Aip07g02072 125 Pfam O-methyltransferase domain 6 75 IPR001077 GO:0008171
Aip07g02072 125 PANTHER O-METHYLTRANSFERASE 1 75 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02072 Aip-Chr7 65981303 65982556 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02072 13 76 Monolignol Biosynthesis Gene Families AT5G54160 36.765 1.73e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02072 - K22588 aip:107607249 169.088