Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02062 ATGCTGGATAAAACTCCTGCTAAGGCTCAATCTGTGATTGATCCACATTACTCATCTTCATACTCTGGCAAGTCTCATTTGGCGGTACAAGCTATGGAAGGTCAAGCTGGAGGAAGACCATCATTTGATCATAATAGTGGATCACATAATCCTCTTTGTTCTCCTGGACAAAATGCTGGAGGAAGTTGGAGATCTAAAGATACCATGAATTCTTTAGCAAGTCGACCTTCATTGGCAGTTGAAGTTCCCAAGAATCTGGCAAATGGTTGGGGTTCTGATGCTGGACTCAGAAATGAAGCAACAAATCTTCCTTCACCTACACCCCAGACTGCTTCAGGTGGGACTAAGATGCAGGCTTTTGAAAATAAATGGTCTCCAACTCCAACCCCTGTCCTATTGGCTGGCTCTCTCTTAGGAAATTCACTCCCTGTTGGGCCTGAAAGTCGTTCAAGTTCACAACCTGGAATGATATCAGCTTCTAAATCAGATAATAATCAAGTACATGTTCATGCAGCGTTACCTGCGATTGCTTCGGGTGTTGACATTCAGACAGCAGGTGTACACTTGCAAAGTCAGAGTGTCAGTAACCATACCTCCCGTTCCGAAGGCCATCAAGGATGGGGCTCTGGTACGGTTCCAAAGCCTGAAGTACAGACGTGGGGAGGTGCTCAACCTCAAAGGATAGAACCAAATAATCCAGTTACTATGCCTGCACAGCCAGCTTCCCATGGTCACTGGGTTGATACTACATCCGTCCAGAACTCTGCCTCATATAGTAATGGAAATCCTAATGGGGCCTTCTCTACACCGAGCTTTCCAGGCATGACTACACCTACACCTACACCTACACCTACACCTGAACCATGGAGACCGCCAAGTTCGAATAGTCAGTCAAACATAGCAGCAGCAGCACCATCCAATGTACCTTATGCTGGTTGGGGTATGCCAGGAAATCAGAATATTAACTGGAGTGGACCTTTACCTGCAAATGTGAACGTAAACTGGATGCCTGGACAGGGGCCAGGACCCAGTAATGCAACTCCAGTATGGGGTGCTCCTAGCCAGGGACCACCTGCGGCAAATGCTGTTGGCTGGGTTGCACCTGGTCAAGGACGTTCGCATGTAAATGCAAATGCAGGTTTGGTTGCACCTGGTCAAGGGCCAACGGTGGGAAGTACTAATCCTGGTTGGGGTTCTTCATCTGGAAATCCAGGCACATGGGGTGGCGAGCAAAGTCGCAATGGGGATAGATTCCACAGCCAGGGCGATCGTGGAACACATGGTGGAGATTCTGGTTATGGAGGTAAATCCTGGAACAGACAATCATCATTTAATGGCAGCGGAAGAGGAGGTTCTTCCAGGCCTCCTGTTGGGGGACAAAGAGGAGTATGTAAGTTCCACGAGAGTGGACATTGCAAGAAGGGGGCCTCCTGTGATTTTATGCACACTTAA 1452 0.4814 MLDKTPAKAQSVIDPHYSSSYSGKSHLAVQAMEGQAGGRPSFDHNSGSHNPLCSPGQNAGGSWRSKDTMNSLASRPSLAVEVPKNLANGWGSDAGLRNEATNLPSPTPQTASGGTKMQAFENKWSPTPTPVLLAGSLLGNSLPVGPESRSSSQPGMISASKSDNNQVHVHAALPAIASGVDIQTAGVHLQSQSVSNHTSRSEGHQGWGSGTVPKPEVQTWGGAQPQRIEPNNPVTMPAQPASHGHWVDTTSVQNSASYSNGNPNGAFSTPSFPGMTTPTPTPTPTPEPWRPPSSNSQSNIAAAAPSNVPYAGWGMPGNQNINWSGPLPANVNVNWMPGQGPGPSNATPVWGAPSQGPPAANAVGWVAPGQGRSHVNANAGLVAPGQGPTVGSTNPGWGSSSGNPGTWGGEQSRNGDRFHSQGDRGTHGGDSGYGGKSWNRQSSFNGSGRGGSSRPPVGGQRGVCKFHESGHCKKGASCDFMHT 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02062 483 MobiDBLite consensus disorder prediction 224 274 - -
Aip07g02062 483 MobiDBLite consensus disorder prediction 381 463 - -
Aip07g02062 483 MobiDBLite consensus disorder prediction 1 74 - -
Aip07g02062 483 MobiDBLite consensus disorder prediction 143 161 - -
Aip07g02062 483 MobiDBLite consensus disorder prediction 435 450 - -
Aip07g02062 483 MobiDBLite consensus disorder prediction 12 26 - -
Aip07g02062 483 SUPERFAMILY CCCH zinc finger 461 482 IPR036855 GO:0046872
Aip07g02062 483 MobiDBLite consensus disorder prediction 218 300 - -
Aip07g02062 483 PANTHER UNCHARACTERIZED 20 483 - -
Aip07g02062 483 MobiDBLite consensus disorder prediction 98 114 - -
Aip07g02062 483 MobiDBLite consensus disorder prediction 275 291 - -
Aip07g02062 483 MobiDBLite consensus disorder prediction 142 161 - -
Aip07g02062 483 MobiDBLite consensus disorder prediction 387 415 - -
Aip07g02062 483 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19 20 483 - -
Aip07g02062 483 MobiDBLite consensus disorder prediction 90 114 - -
Aip07g02062 483 MobiDBLite consensus disorder prediction 41 74 - -
Aip07g02062 483 ProSiteProfiles Zinc finger C3H1-type profile. 458 483 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02062 Aip-Chr7 64817924 64819375 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aip07g02062 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02062 - - aip:107608759 926.391