Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02057 atgtaccacgaaatagtggtgcatcatttcctctccCCCACCCCATCCCCGAAATCCCCATTCCCCCTCACTCGAGTTCTTCACTTAGCACTTAGCACTTTCGTCCCAAACCCTCATCTCTTCCAGCAGCCACGCACCCTGGTCCCCGTGACATGCGGCACTATCTCTCGTTGTGGTAGAGCCCCTCTCGTCATCACAAGTCACCAGCTTCTTCCTCGTGGTTGTCGAAGTGTAATCTGTCGCAAGCCCTTCTCCTCTGCTCATCAGTCACCAGTCCATCGTCTATCGTGGTTGCCAGCCCAAATAATAACTTCTACAGGTATGATTTTTAGATCTTCTTTAGCTGGTGAATTAAGTATTACTGAGCTTGATAATCTGATGACTGTGGTTGCCAACCCAAGGCAATTCAAGTTACCAGACTGGTTCCTCATTAGGAAGAAGGACTACAAGGATGGCAAGTACTCCCAGATCGTGTCCAACGCCCTCGACATAAAGCTCAGGGATGACTTGGAGAGACTCAAGAGAATCAGGTCTCACTCATAA 543 0.4604 MYHEIVVHHFLSPTPSPKSPFPLTRVLHLALSTFVPNPHLFQQPRTLVPVTCGTISRCGRAPLVITSHQLLPRGCRSVICRKPFSSAHQSPVHRLSWLPAQIITSTGMIFRSSLAGELSITELDNLMTVVANPRQFKLPDWFLIRKKDYKDGKYSQIVSNALDIKLRDDLERLKRIRSHS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02057 180 Pfam Ribosomal protein S13/S18 100 179 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Aip07g02057 180 PANTHER 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 115 179 - -
Aip07g02057 180 PANTHER 40S RIBOSOMAL PROTEIN S18-RELATED 115 179 - -
Aip07g02057 180 Gene3D 30s ribosomal protein s13, domain 2 151 180 IPR027437 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02057 Aip-Chr7 63978239 63979481 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02057 100 179 Cytoplasmic Ribosomal Protein Gene Family AT4G09800 70.000 1.24e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02057 K02964 - qsu:112019340 121.709