Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02052 ATGCCAACGGCAACAAACAGTATTGAAAAAGAAGAAGAAGAAACAGGGATAAAGGGGGATCAAAGTTCAACGAAGTGCCAAGACTGTGGGAACCAAGCGAAGAAGGAGTGCTCATATTGGAGGTGCAGAACATGCTGCAAGAACAAAGGATTCCATTGTCAAACCCATATCAAGAGCACTTGGGTCCCCGTTGACCGAAGGCGCCACAGGGAAGTAAATAACCACTTTCAGTTGCACCACCCACATATCTCCAAAAAGCACAAGCACTTCTACTCACCATCACCAGAGGACAAGTTAAAGTTGCCATCTGCTACGAATTCCATGGCTATATTTCGGCGCGTTGAGGTTAGGTCAATGGATCATGCGGTTAACGAAATTGGCTATCAAACATGTGTCAACATTGGAGGACATGTATTTAGTGGTCTTCTGTATGATCATGGCCCT 444 0.4527 MPTATNSIEKEEEETGIKGDQSSTKCQDCGNQAKKECSYWRCRTCCKNKGFHCQTHIKSTWVPVDRRRHREVNNHFQLHHPHISKKHKHFYSPSPEDKLKLPSATNSMAIFRRVEVRSMDHAVNEIGYQTCVNIGGHVFSGLLYDHGP 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02052 148 PANTHER BNAC01G23660D PROTEIN 19 148 - -
Aip07g02052 148 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 101 148 IPR006511 -
Aip07g02052 148 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 25 67 IPR006510 -
Aip07g02052 148 Pfam Domain of unknown function (DUF702) 23 148 - -
Aip07g02052 148 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 19 148 IPR007818 GO:0003700|GO:0006355
Aip07g02052 148 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02052 Aip-Chr7 62919743 62920442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02052 25 147 C2H2 Transcription Factor Family AT2G21400 47.328 3.69e-37 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Aip07g02052 DUF702 8.5e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02052 - - aip:110269564 186.808