Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02049 ATGGAGGGGACCGAGGAGGTTTCATCTAATTTTCAAGAGAATGTCACTCCAGGGGTGAAAGAGGACCCGATAGGTAATGAGACATTTGTTGCAGAAACGGAATCTGTTCCGATTGGTGCTAGTCAGGCAGACGACCAAAGAGATGTCATCGTTCTCGACGGAATAGGTTCATTTGGTGCAATTGATTTTGATGCGTTGCGGTCGAAGGTAGGGCGCTGCAAGAAGGCAGGATCTGAAGGAGACATTATATGGCAAATTTTTGTGTGCTCACGACAAGGTGAACGAGATGCAAAGCATGTTCATAGAATTGATAGGAAGATGGATCCTAGACCAGTAACGCGATGCGGGTGTAATGCGCGAATAAAAGTTCATGTTGACTCAAGGAACGGGCGATGGTACGTTGAGTTCCTCTCCGATGAACATAACCATGACATGTTGTAG 441 0.4626 MEGTEEVSSNFQENVTPGVKEDPIGNETFVAETESVPIGASQADDQRDVIVLDGIGSFGAIDFDALRSKVGRCKKAGSEGDIIWQIFVCSRQGERDAKHVHRIDRKMDPRPVTRCGCNARIKVHVDSRNGRWYVEFLSDEHNHDML 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02049 146 MobiDBLite consensus disorder prediction 1 16 - -
Aip07g02049 146 PANTHER OS07G0283300 PROTEIN 69 145 - -
Aip07g02049 146 Pfam FAR1 DNA-binding domain 74 145 IPR004330 -
Aip07g02049 146 MobiDBLite consensus disorder prediction 1 25 - -
Aip07g02049 146 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 69 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02049 Aip-Chr7 62426902 62427541 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g02049 FAR1 4e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02049 - - adu:107486256 270.011