Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02045 ATGGTGCAACCAGCTCTCCCTGTAGGTGGAGCACCAGGCCTTCACCCCCAAGAGGACGACACCATAATTAGAGCTCACGCTCGGTTTGGCAACAAGTGGGCCACCATAGCCCGACTCCTCTCTGGCAAAACTGACAAAGCCATTAAGAACCACTGGAACTCCACCCTCAAATGCAAGTGCACCTCCATGGGCTCCATCGACGATCCTCACTTGGCGCAACCACTCAAATGCTCCGTCAGCGTTTGCGCCACCGTACCTGTGTCGTTGAGGTCAATGGCGGTGTTAGAGAAAGCTTGGAGGATTTCAGGGTTAGAGTCATAG 321 0.5421 MVQPALPVGGAPGLHPQEDDTIIRAHARFGNKWATIARLLSGKTDKAIKNHWNSTLKCKCTSMGSIDDPHLAQPLKCSVSVCATVPVSLRSMAVLEKAWRISGLES 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02045 106 Gene3D - 15 75 - -
Aip07g02045 106 SUPERFAMILY Homeodomain-like 16 61 IPR009057 -
Aip07g02045 106 CDD SANT 16 56 IPR001005 -
Aip07g02045 106 PANTHER MYB PROTEIN-RELATED 15 87 - -
Aip07g02045 106 Pfam Myb-like DNA-binding domain 16 55 IPR001005 -
Aip07g02045 106 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 60 IPR017930 -
Aip07g02045 106 ProSiteProfiles Myb-like domain profile. 17 56 IPR001005 -
Aip07g02045 106 SMART sant 10 58 IPR001005 -
Aip07g02045 106 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 15 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02045 Aip-Chr7 62147844 62148164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02045 13 61 MYB Transcription Factor Family AT2G23290 79.592 2.32e-22 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip07g02045 Myb_DNA-binding 8.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02045 K09422 - aip:107615096 131.724