Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02042 ATGCCGTCGATTTTTATTACTAAAAATACAAATACTTGCGTCCTATTCCTGCCTCCAAAGTTCAAAAACCCAATTCCCCAAAATTCCCCATTTCATCCCCAAATTCCCCAATCACCAGAAACGCAATTACCCTTAGTTCTACCACAAATTCACAGTTGCACCGCCGTCATTCTCCGCTGCCGTCGTCGCTCCGTCACGGTTGCACCGCTGTCACGCTCTGTCCCTGCCGTGCCTCTGTCGCTACTCAAGTTCGCGCCATTGTTGCTCCTCTTGCTCACGCCGCCGTCGCTCCGTTGCTGCCATGCCACCATCGCTCATTCTCTCTGTTGCCGCCGTTTCTCCTCCTATCACTCCAAAGAACATCAAAGAACCCTAGCACTTCGCGAAGAACCACAGCACTCTACGAAGAATATCACCGATGCTCGCAATACCTCCGTCGATGCTCCCTTCGCCGCCGCTCCCTTCCTTCGCTGCAAACCCCTAACCCTTTCCATTTTTTGCTGGGCTATCGAGCCAGCAGGTCCTGCTCAATCAGTGGTTTGGGAAGCCATGGTGCCTTCCAAAAAGAGGACTTGTGGTGTCTACAATGCAAACAAATTTGCCAAGCTTGTGAGAAGAAGAGAGTTCATGGCCAGCACTACCGAGGGAACCACCGGGGCTCTTACCTGCCCCACTTGTGGCTGCCATAGAAACTTCCATAGAAGAAAGGAACTAGCTGCACCATCCAGCATTGAGAAGCCGAAAAGCAAGGTCTTGGCGGTATGGTTCAGTTGGCACCCAGCAAAAGTGGTAAAAACTTTAGATGCAACAATAAAAATAATCAGTGCAAGATACTATCTTAAAGGTCAACCTTCAGCAAGAGACATTGTTGGGCATGGAAGCCATACAACATCAATTGCAACAGGGAATAAAGTTGTGGGAGCAAGCTTCTATGGAATCACCAAAGGAGTTGCAAGAGGAGGTGTCCCATCGGCAAGAATTGCTGCTTATAGTGTGTGTTATGAACAAGAGTGCAAAGTTGATGCCATATTGGCTGCTTTTGATGATGCCATTGCCGATGGTGTAGATCTTATCACAATTTCAATGGGGGCAGATGAGCAAATGACCTTTGATGAAGACATCACAGCAATTGGATCATTTCATGCAATGGAAAAGGGGATCCTCACCATAAACTCTGTAGGTAACAATGGTCTTAACATTGTAACATTTAGTGTATCACCTTGGTTATTCACTGTTGCAGCTACCACCTTTCATGATGTTTTGCTTGGCAATggataa 1278 0.4718 MPSIFITKNTNTCVLFLPPKFKNPIPQNSPFHPQIPQSPETQLPLVLPQIHSCTAVILRCRRRSVTVAPLSRSVPAVPLSLLKFAPLLLLLLTPPSLRCCHATIAHSLCCRRFSSYHSKEHQRTLALREEPQHSTKNITDARNTSVDAPFAAAPFLRCKPLTLSIFCWAIEPAGPAQSVVWEAMVPSKKRTCGVYNANKFAKLVRRREFMASTTEGTTGALTCPTCGCHRNFHRRKELAAPSSIEKPKSKVLAVWFSWHPAKVVKTLDATIKIISARYYLKGQPSARDIVGHGSHTTSIATGNKVVGASFYGITKGVARGGVPSARIAAYSVCYEQECKVDAILAAFDDAIADGVDLITISMGADEQMTFDEDITAIGSFHAMEKGILTINSVGNNGLNIVTFSVSPWLFTVAATTFHDVLLGNG 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02042 425 Pfam Subtilase family 284 399 IPR000209 GO:0006508|GO:0008236
Aip07g02042 425 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 269 418 - -
Aip07g02042 425 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 269 418 IPR045051 -
Aip07g02042 425 SUPERFAMILY Subtilisin-like 278 419 IPR036852 GO:0004252|GO:0006508
Aip07g02042 425 Gene3D Peptidase S8/S53 domain 270 417 IPR036852 GO:0004252|GO:0006508
Aip07g02042 425 Pfam ZF-HD protein dimerisation region 207 237 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02042 Aip-Chr7 61858831 61869428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02042 272 425 Subtilisin-like Serine Gene Family AT3G46850 59.639 2.88e-50 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aip07g02042 Peptidase_S8 2.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02042 - - ahf:112755745 226.098