Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02039 ATGTCCATAAACGAGGATGATGTGAAAAATGATTTTGATAATGATTTGGGTGATGATTTCGATTATCAATCGAATGCAGAAGATGATGCTGAAGACGACGATGTGGATTCGCTGGATTCTACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGTAGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAGGCGTGCCAATTTTATAACACTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGTAGGCAACTTGTTTGCAACAAAGAGGGCTCGAGGAATATGAGGTATCTTGATCTGGATGATAGATCAAGGGAGGCAAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACAATCTGACACCACCCCAATTTGCGCATCTGGTTCTGGCCAATCGTCGTCTCACTGTCATTGATAAAATCCAAGTAGAAAATCTTCATAATTTTGGTGTCAAGACCTGCCATATTATGGGGTATATTGCGTTCCAGAAGGGTGGATATCGTCATGCTGGATTTACACGCAAAGATTTGTACAACTACATTGATCGTTATCATATTGTTGCCTTTGACTCAACCTACAAGAAGAATAAATACAATAAGCCTTTGGTCATTTTCTCCGGATGCAATCATCACGGGCAGACTGTTATCTTTGGATTCGACCTACTATCCGACGAAACCACAGAGACGTATAAGTGGTTGTTGGAAACCTTTGTTGAAGCGATGGGTGGGAAAAGTGCTAAAACAGTAATAACTGACGGAGACCTTGCCATGCGAGATGCAATCAAGAATGTTCTTCCTGATGCGACCCATCGGTTATGTGGATGGCATCTGCAGAGAAATGCATGTGAAAATATAAAGAATCCTAATTTTCTGCCCGATTTTAAAGGTCTTATATACGACAACAACGACCACAGAGACTTTGATCGGAGATGGGCAGCCATTTTGGATAAGCACAACCTTGTTGGGAGTACCTAG 1041 0.4111 MSINEDDVKNDFDNDLGDDFDYQSNAEDDAEDDDVDSLDSTSKSEEVCGVKRIVDLMVEDIWNLEFRTEDEACQFYNTYSCWHGFVMRKDDVVRDNQGRIISRQLVCNKEGSRNMRYLDLDDRSREARWKVSCFVESHNHNLTPPQFAHLVLANRRLTVIDKIQVENLHNFGVKTCHIMGYIAFQKGGYRHAGFTRKDLYNYIDRYHIVAFDSTYKKNKYNKPLVIFSGCNHHGQTVIFGFDLLSDETTETYKWLLETFVEAMGGKSAKTVITDGDLAMRDAIKNVLPDATHRLCGWHLQRNACENIKNPNFLPDFKGLIYDNNDHRDFDRRWAAILDKHNLVGST 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02039 346 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 207 342 IPR031052 GO:0006355
Aip07g02039 346 Pfam FAR1 DNA-binding domain 74 117 IPR004330 -
Aip07g02039 346 MobiDBLite consensus disorder prediction 1 42 - -
Aip07g02039 346 MobiDBLite consensus disorder prediction 11 39 - -
Aip07g02039 346 Pfam MULE transposase domain 208 302 IPR018289 -
Aip07g02039 346 PANTHER OS02G0262500 PROTEIN 207 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02039 Aip-Chr7 61690782 61692056 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g02039 MULE 2.2e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02039 - - aip:107607270 682.559