Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02036 ATGAGAGAGGAGGAGCCGTCACCAAACGCGTCGTCACCGTTGGAGGAGCTTCGCTCTTCGCCGCCGCCGAGGAGGGGAAAGAGGAGCTGCTCCCTCGCTAGTCATCGTCGTGCTTCCTGGAAATCGAAGTTTTACAGATTCGATAAGGAAAGGAACCGTGGAAGGAGAGAACCGATGGTGCCATCAAGTTCCCTAAGAATAAGCTTATCTGCTTTTGCTTTGTTGCTGCTACCTGACTCTGTTCCAATCTTAGCCTCAGGTGCCTTTTTCCTGTATTTGCAGAACTTCTCTCAAGAGCTTCAAAAGCTTGAGGAGTATTGCATGAACCAGAAATCCATTGATTCAATGGGTGCTATAACAAAGAGAATGACTGCAATGGAAGAAATGGCCAGAATGGATGTCCTATGCAGTGATAAAACAGGCACATTAACTCTCAACAAGCTTACAGTGGACAAGAATCTAATTGAGGTCTTTGCTGATGGAGTTAATCAGGACATGGTTGTACTTATGGCTGCAAGGGCATCAAGGCTAGAGAACCAAGATGCAATTGATTGTGCAATTGTATCTATGTTAGCAGATCCAAAGGAGGAAACAGGAAGGCGTCTTGGAATGGGCTCTAACATGTATCCTTCTGCGTCGCTGCTAGGAGAAAGCAAAGATAATTTTGCTTCTGTTCCCGGCGATGATCTTATAGAGAATGCAGATGGTTTTGCTGGTGTCTTTCCTGAGCACAAATATGAGATTGTGAAGAGCTTACAAGCTAGAAAGCACATTTGTGGGATGACTGGTGATGGAGTGAATGATGCACCAGCTTTGAAGATAGCAAACATAGGTATCGCTGTAGTAGATGCAACAGATGCTGCAAGAAGTGCCTCTAATACAGTTCTAACAGAACCTGGGTTGAGTGTGATCATAAGTGTTGTTTTAACTAGCCGTGCAATTTTCCAAAGAATGAAAAACTACACAGTAATCCCCCAACTACGAAAATATTAA 993 0.4421 MREEEPSPNASSPLEELRSSPPPRRGKRSCSLASHRRASWKSKFYRFDKERNRGRREPMVPSSSLRISLSAFALLLLPDSVPILASGAFFLYLQNFSQELQKLEEYCMNQKSIDSMGAITKRMTAMEEMARMDVLCSDKTGTLTLNKLTVDKNLIEVFADGVNQDMVVLMAARASRLENQDAIDCAIVSMLADPKEETGRRLGMGSNMYPSASLLGESKDNFASVPGDDLIENADGFAGVFPEHKYEIVKSLQARKHICGMTGDGVNDAPALKIANIGIAVVDATDAARSASNTVLTEPGLSVIISVVLTSRAIFQRMKNYTVIPQLRKY 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02036 330 PANTHER CALCIUM-TRANSPORTING ATPASE 196 323 - -
Aip07g02036 330 PANTHER CALCIUM-TRANSPORTING ATPASE 111 196 - -
Aip07g02036 330 Gene3D - 148 196 IPR023299 GO:0000166
Aip07g02036 330 PRINTS H+-transporting ATPase (proton pump) signature 234 250 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip07g02036 330 PRINTS H+-transporting ATPase (proton pump) signature 262 278 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip07g02036 330 PRINTS H+-transporting ATPase (proton pump) signature 293 318 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip07g02036 330 MobiDBLite consensus disorder prediction 1 37 - -
Aip07g02036 330 ProSitePatterns E1-E2 ATPases phosphorylation site. 138 144 IPR018303 -
Aip07g02036 330 SUPERFAMILY HAD-like 132 309 IPR036412 -
Aip07g02036 330 Gene3D - 115 132 - -
Aip07g02036 330 Gene3D - 300 323 - -
Aip07g02036 330 Gene3D - 133 147 IPR023214 -
Aip07g02036 330 Gene3D - 197 299 IPR023214 -
Aip07g02036 330 PANTHER PLASMA MEMBRANE ATPASE 196 323 - -
Aip07g02036 330 PANTHER PLASMA MEMBRANE ATPASE 111 196 - -
Aip07g02036 330 Pfam haloacid dehalogenase-like hydrolase 215 275 - -
Aip07g02036 330 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 237 323 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02036 Aip-Chr7 61466880 61469947 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02036 196 323 Primary Pumps ATPases AT5G62670 82.946 1.63e-66 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02036 K01535 - ahf:112729871 398.667