Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02008 ATGGCTATGATGGAACTTGCTGAAAATGATTATAGGATTCGGTGTGCCTTATTTGGTGAATATGTTGATGAACTTAATCAATTTCTATCTTCTGGAGTTGGACTTCAGAATGTTATGTTTGCATCAAAACTTGGATTTAATTTTGACATCCCAGAGGTGGCAGCTTTTTGGAAAAGTTCTATTCCACATGGAGTTAGTGCATCCCAACCCATTGGCATTGTTGGCTCTGGAAAAAATATCAGAATAGAAGAAGACTTTATGAAGCTCACACCTAAGTGTACTGTGAAGTCGCTTGATGATAACAACCGGGCTAGAACATTTGTTGTACTAGCAAAACTAGCTAAAATAGTTGAGGATGGTCCTTGGTGGTCTAGAGTGAAGGTGTTGGTTGAGGATTCCACTGGTGTTTCTATTTTTGTCCTCTTTGATCGTGAGACAAGTTACTTACTGAATAAGATTTGTGCTCAACTGTTTGAACAACATCTTAAGGATGTTGATGTTGTGTTTAGTACACAGTCTCCTCCTATATTCCAAGAAATTGTTGGAAAAACTATGCTGTTCAAGGTTCTTAGTAGGCCTGTTGGAATGGAGAAATTCAAAGGGACTTATCCAATGAGGCGTGTTTGTGATGATGCTGCAATAGTTGGAATGTTTGAGCTCTCTGGTTCAGATTTGAGTCCCAAAAAGGCTGAGTTTGTACCAAAAGGAGAAGGATCATTTGGGAGACCCTCTAAGGTTACTAAATCACCGAATTTGAGATTGACTCATTCCAGCTGCTCTGAGCTCTTTGCTGATTCGCCTCAATGTACCCAAAAGGAATCAAGTGTTGTTGACTTGGGAGCTGATGAAGATGCTAAGCTTTGCAATTGTGTGAGGGTGTCCAATAAGTTAAGATGGCTATTGATGTGCCATGAGAGCAAATTTGGTGACTGGCAACGGGTCAGGATGCAAGAGACTTCCAAAGAGATACCTGCTGGATCGTTGCCTAGGTTGTTGGATGTTATTCTTCGTCCCGAGATTGTGGAACAGGCCAGGGCTGGAACTATAATTGTTATTCCTGACCTTTTGGCATTGGCATCCCCTGGAGAGAGATCAAAATGCCTCCGGGAAGGTTCTCAACGCAAGGGTCCTGCAGTTGGAAATGAAGGTGTTAGGGGCCTTAGAGCCCTTGGAGTCAGAGACCTCTCTTATCGCCTAGCATTTATTGCCAACTCCGTTCAGAGTAAGAGACGTGGTGGATAA 1242 0.4235 MAMMELAENDYRIRCALFGEYVDELNQFLSSGVGLQNVMFASKLGFNFDIPEVAAFWKSSIPHGVSASQPIGIVGSGKNIRIEEDFMKLTPKCTVKSLDDNNRARTFVVLAKLAKIVEDGPWWSRVKVLVEDSTGVSIFVLFDRETSYLLNKICAQLFEQHLKDVDVVFSTQSPPIFQEIVGKTMLFKVLSRPVGMEKFKGTYPMRRVCDDAAIVGMFELSGSDLSPKKAEFVPKGEGSFGRPSKVTKSPNLRLTHSSCSELFADSPQCTQKESSVVDLGADEDAKLCNCVRVSNKLRWLLMCHESKFGDWQRVRMQETSKEIPAGSLPRLLDVILRPEIVEQARAGTIIVIPDLLALASPGERSKCLREGSQRKGPAVGNEGVRGLRALGVRDLSYRLAFIANSVQSKRRGG 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02008 413 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 383 404 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Aip07g02008 413 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 331 342 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Aip07g02008 413 SUPERFAMILY Nucleic acid-binding proteins 297 352 IPR012340 -
Aip07g02008 413 Pfam MCM OB domain 259 352 IPR033762 -
Aip07g02008 413 Gene3D - 286 364 IPR012340 -
Aip07g02008 413 Gene3D - 91 215 IPR012340 -
Aip07g02008 413 PANTHER DNA REPLICATION LICENSING FACTOR MCM6 286 406 - -
Aip07g02008 413 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 286 406 IPR031327 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02008 Aip-Chr7 60229794 60245827 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02008 295 407 Core DNA Replication Machinery Family AT5G44635 71.667 1.69e-49 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02008 K02542 - aip:107607298 454.136