Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01984 ATGGCTGCTTCTTCAAACTCCAGTGGTGGAGGAGAGTCATCATGGACCCCAAAGCAGAACAAGCTGTTCGAGAAGGCGCTTGCCAAGTACGACAAGGACACACCAGATAGGTGGCATAATGTGGCAAGGGAAGTTGGTGGGAATAAAACAGCTGAGGAGGTTAAGAGGCACTATGAGATCCTCTTGGAGGATATCAAACACATTGAGTCTGGCCATGTTCCCACACCCAACTACAAGAAGAACTCCACT 249 0.49 MAASSNSSGGGESSWTPKQNKLFEKALAKYDKDTPDRWHNVAREVGGNKTAEEVKRHYEILLEDIKHIESGHVPTPNYKKNST 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01984 83 CDD SANT 15 62 IPR001005 -
Aip07g01984 83 MobiDBLite consensus disorder prediction 1 20 - -
Aip07g01984 83 ProSiteProfiles Myb-like domain profile. 12 62 IPR001005 -
Aip07g01984 83 ProSiteProfiles SANT domain profile. 10 66 IPR017884 -
Aip07g01984 83 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 81 IPR044636 GO:0003700
Aip07g01984 83 Pfam Myb-like DNA-binding domain 13 58 IPR001005 -
Aip07g01984 83 Gene3D - 6 75 - -
Aip07g01984 83 PANTHER PROTEIN RADIALIS-LIKE 3 1 81 - -
Aip07g01984 83 SUPERFAMILY Homeodomain-like 13 70 IPR009057 -
Aip07g01984 83 SMART sant 11 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01984 Aip-Chr7 58151895 58152143 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip07g01984 Myb_DNA-binding 6.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01984 - - mus:103976638 126.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01984 07 58151895 58152143 Aip07g01984 07 58151895 58152143 ECH